Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.15■□□□□ 0.18
Pdlim1O70400 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC16.15■□□□□ 0.18
Pdlim1O70400 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pdlim1O70400 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pdlim1O70400 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.15■□□□□ 0.18
Pdlim1O70400 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
Pdlim1O70400 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pdlim1O70400 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pdlim1O70400 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pdlim1O70400 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pdlim1O70400 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Pdlim1O70400 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pdlim1O70400 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pdlim1O70400 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pdlim1O70400 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.18
Pdlim1O70400 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.18
Pdlim1O70400 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pdlim1O70400 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pdlim1O70400 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Pdlim1O70400 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pdlim1O70400 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pdlim1O70400 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pdlim1O70400 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pdlim1O70400 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pdlim1O70400 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.14■□□□□ 0.17
Pdlim1O70400 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pdlim1O70400 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pdlim1O70400 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pdlim1O70400 Gm14859-201ENSMUST00000117752 357 ntBASIC16.14■□□□□ 0.17
Pdlim1O70400 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pdlim1O70400 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pdlim1O70400 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.14■□□□□ 0.17
Pdlim1O70400 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pdlim1O70400 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pdlim1O70400 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pdlim1O70400 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pdlim1O70400 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pdlim1O70400 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Pdlim1O70400 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pdlim1O70400 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pdlim1O70400 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pdlim1O70400 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pdlim1O70400 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pdlim1O70400 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pdlim1O70400 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pdlim1O70400 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pdlim1O70400 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pdlim1O70400 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pdlim1O70400 Gm7284-201ENSMUST00000131667 944 ntBASIC16.13■□□□□ 0.17
Pdlim1O70400 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Pdlim1O70400 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC16.13■□□□□ 0.17
Pdlim1O70400 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pdlim1O70400 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pdlim1O70400 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pdlim1O70400 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pdlim1O70400 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pdlim1O70400 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pdlim1O70400 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Pdlim1O70400 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pdlim1O70400 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pdlim1O70400 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pdlim1O70400 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pdlim1O70400 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pdlim1O70400 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pdlim1O70400 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pdlim1O70400 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Pdlim1O70400 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pdlim1O70400 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.12■□□□□ 0.17
Pdlim1O70400 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pdlim1O70400 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pdlim1O70400 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pdlim1O70400 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pdlim1O70400 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pdlim1O70400 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pdlim1O70400 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pdlim1O70400 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.12■□□□□ 0.17
Pdlim1O70400 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pdlim1O70400 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pdlim1O70400 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pdlim1O70400 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC16.12■□□□□ 0.17
Pdlim1O70400 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Pdlim1O70400 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pdlim1O70400 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pdlim1O70400 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.12■□□□□ 0.17
Pdlim1O70400 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pdlim1O70400 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pdlim1O70400 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pdlim1O70400 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.11■□□□□ 0.17
Pdlim1O70400 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pdlim1O70400 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pdlim1O70400 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Pdlim1O70400 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.11■□□□□ 0.17
Pdlim1O70400 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pdlim1O70400 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.11■□□□□ 0.17
Pdlim1O70400 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pdlim1O70400 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pdlim1O70400 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.11■□□□□ 0.17
Pdlim1O70400 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pdlim1O70400 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pdlim1O70400 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms