Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.01■□□□□ 0.47
Prom1O54990 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Prom1O54990 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Prom1O54990 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Prom1O54990 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.01■□□□□ 0.47
Prom1O54990 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Prom1O54990 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.01■□□□□ 0.47
Prom1O54990 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Prom1O54990 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC18.01■□□□□ 0.47
Prom1O54990 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Prom1O54990 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Prom1O54990 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18■□□□□ 0.47
Prom1O54990 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Prom1O54990 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Prom1O54990 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Prom1O54990 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18■□□□□ 0.47
Prom1O54990 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Prom1O54990 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC18■□□□□ 0.47
Prom1O54990 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Prom1O54990 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC18■□□□□ 0.47
Prom1O54990 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC18■□□□□ 0.47
Prom1O54990 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Prom1O54990 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Prom1O54990 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Prom1O54990 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Prom1O54990 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Prom1O54990 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Prom1O54990 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Prom1O54990 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Prom1O54990 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Prom1O54990 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.99■□□□□ 0.47
Prom1O54990 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.99■□□□□ 0.47
Prom1O54990 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.99■□□□□ 0.47
Prom1O54990 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Prom1O54990 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Prom1O54990 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Prom1O54990 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC17.99■□□□□ 0.47
Prom1O54990 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Prom1O54990 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Prom1O54990 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC17.99■□□□□ 0.47
Prom1O54990 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC17.99■□□□□ 0.47
Prom1O54990 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Prom1O54990 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Prom1O54990 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Prom1O54990 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Prom1O54990 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Prom1O54990 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Prom1O54990 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Prom1O54990 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Prom1O54990 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Prom1O54990 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC17.98■□□□□ 0.47
Prom1O54990 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Prom1O54990 Gm12260-201ENSMUST00000122447 411 ntBASIC17.98■□□□□ 0.47
Prom1O54990 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC17.98■□□□□ 0.47
Prom1O54990 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC17.98■□□□□ 0.47
Prom1O54990 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Prom1O54990 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC17.98■□□□□ 0.47
Prom1O54990 Gm27628-201ENSMUST00000184911 107 ntBASIC17.98■□□□□ 0.47
Prom1O54990 Gm6550-201ENSMUST00000187574 993 ntBASIC17.98■□□□□ 0.47
Prom1O54990 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC17.98■□□□□ 0.47
Prom1O54990 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Prom1O54990 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Prom1O54990 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Prom1O54990 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Prom1O54990 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Prom1O54990 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Prom1O54990 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Prom1O54990 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Prom1O54990 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Prom1O54990 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Prom1O54990 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Prom1O54990 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Prom1O54990 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Prom1O54990 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Prom1O54990 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Prom1O54990 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Prom1O54990 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Prom1O54990 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Prom1O54990 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Prom1O54990 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.97■□□□□ 0.47
Prom1O54990 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC17.97■□□□□ 0.47
Prom1O54990 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Prom1O54990 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Prom1O54990 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Prom1O54990 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Prom1O54990 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Prom1O54990 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Prom1O54990 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC17.96■□□□□ 0.47
Prom1O54990 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Prom1O54990 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Prom1O54990 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.96■□□□□ 0.47
Prom1O54990 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.96■□□□□ 0.47
Prom1O54990 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Prom1O54990 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Prom1O54990 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Prom1O54990 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.96■□□□□ 0.47
Prom1O54990 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Prom1O54990 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Prom1O54990 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Prom1O54990 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms