Protein–RNA interactions for Protein: O54751

Crx, Cone-rod homeobox protein, mousemouse

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CrxO54751 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CrxO54751 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CrxO54751 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
CrxO54751 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CrxO54751 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
CrxO54751 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC12.01□□□□□ -0.49
CrxO54751 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CrxO54751 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CrxO54751 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CrxO54751 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC12.01□□□□□ -0.49
CrxO54751 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CrxO54751 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC12.01□□□□□ -0.49
CrxO54751 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC12.01□□□□□ -0.49
CrxO54751 Cdc34b-202ENSMUST00000188741 1252 ntBASIC12.01□□□□□ -0.49
CrxO54751 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC12.01□□□□□ -0.49
CrxO54751 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC12.01□□□□□ -0.49
CrxO54751 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CrxO54751 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
CrxO54751 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
CrxO54751 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CrxO54751 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CrxO54751 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
CrxO54751 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CrxO54751 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12.01□□□□□ -0.49
CrxO54751 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
CrxO54751 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC12.01□□□□□ -0.49
CrxO54751 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CrxO54751 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.01□□□□□ -0.49
CrxO54751 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CrxO54751 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
CrxO54751 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CrxO54751 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CrxO54751 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
CrxO54751 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC12.01□□□□□ -0.49
CrxO54751 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CrxO54751 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
CrxO54751 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CrxO54751 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
CrxO54751 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
CrxO54751 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CrxO54751 Gm43352-201ENSMUST00000196419 3065 ntBASIC12□□□□□ -0.49
CrxO54751 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CrxO54751 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CrxO54751 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
CrxO54751 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
CrxO54751 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC12□□□□□ -0.49
CrxO54751 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CrxO54751 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
CrxO54751 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
CrxO54751 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
CrxO54751 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12□□□□□ -0.49
CrxO54751 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC12□□□□□ -0.49
CrxO54751 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC12□□□□□ -0.49
CrxO54751 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
CrxO54751 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC12□□□□□ -0.49
CrxO54751 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC12□□□□□ -0.49
CrxO54751 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CrxO54751 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
CrxO54751 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CrxO54751 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CrxO54751 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
CrxO54751 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC12□□□□□ -0.49
CrxO54751 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CrxO54751 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CrxO54751 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
CrxO54751 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
CrxO54751 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
CrxO54751 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
CrxO54751 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
CrxO54751 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
CrxO54751 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC12□□□□□ -0.49
CrxO54751 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CrxO54751 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
CrxO54751 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CrxO54751 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
CrxO54751 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
CrxO54751 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
CrxO54751 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
CrxO54751 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CrxO54751 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CrxO54751 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
CrxO54751 Gm26971-201ENSMUST00000182423 1072 ntBASIC11.99□□□□□ -0.49
CrxO54751 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC11.99□□□□□ -0.49
CrxO54751 Gm43060-201ENSMUST00000200621 289 ntBASIC11.99□□□□□ -0.49
CrxO54751 CT010467.1-202ENSMUST00000205406 714 ntBASIC11.99□□□□□ -0.49
CrxO54751 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
CrxO54751 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CrxO54751 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC11.99□□□□□ -0.49
CrxO54751 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CrxO54751 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CrxO54751 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC11.99□□□□□ -0.49
CrxO54751 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CrxO54751 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CrxO54751 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
CrxO54751 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CrxO54751 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
CrxO54751 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
CrxO54751 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CrxO54751 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
CrxO54751 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms