Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Matn3O35701 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Matn3O35701 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Matn3O35701 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Matn3O35701 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Matn3O35701 App-207ENSMUST00000227737 2827 ntBASIC14.92□□□□□ -0.02
Matn3O35701 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
Matn3O35701 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Matn3O35701 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Matn3O35701 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Matn3O35701 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Matn3O35701 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Matn3O35701 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Matn3O35701 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Matn3O35701 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Matn3O35701 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Matn3O35701 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Matn3O35701 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Matn3O35701 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Matn3O35701 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.92□□□□□ -0.02
Matn3O35701 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Matn3O35701 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Matn3O35701 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Matn3O35701 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
Matn3O35701 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Matn3O35701 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Matn3O35701 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Matn3O35701 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Matn3O35701 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.91□□□□□ -0.02
Matn3O35701 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Matn3O35701 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Matn3O35701 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Matn3O35701 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Matn3O35701 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Matn3O35701 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Matn3O35701 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Matn3O35701 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Matn3O35701 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Matn3O35701 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Matn3O35701 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Matn3O35701 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Matn3O35701 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Matn3O35701 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC14.91□□□□□ -0.02
Matn3O35701 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Matn3O35701 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Matn3O35701 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC14.91□□□□□ -0.02
Matn3O35701 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Matn3O35701 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC14.91□□□□□ -0.02
Matn3O35701 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Matn3O35701 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Matn3O35701 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Matn3O35701 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC14.91□□□□□ -0.02
Matn3O35701 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.91□□□□□ -0.02
Matn3O35701 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Matn3O35701 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Matn3O35701 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Matn3O35701 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Matn3O35701 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Matn3O35701 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Matn3O35701 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Matn3O35701 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Matn3O35701 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Matn3O35701 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Matn3O35701 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Matn3O35701 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Matn3O35701 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Matn3O35701 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Matn3O35701 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Matn3O35701 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
Matn3O35701 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Matn3O35701 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC14.9□□□□□ -0.02
Matn3O35701 Gm5408-201ENSMUST00000197998 747 ntBASIC14.9□□□□□ -0.02
Matn3O35701 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC14.9□□□□□ -0.02
Matn3O35701 CT010444.2-201ENSMUST00000217877 1629 ntBASIC14.9□□□□□ -0.02
Matn3O35701 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Matn3O35701 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Matn3O35701 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Matn3O35701 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.9□□□□□ -0.02
Matn3O35701 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Matn3O35701 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Matn3O35701 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Matn3O35701 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Matn3O35701 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
Matn3O35701 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
Matn3O35701 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Matn3O35701 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Matn3O35701 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Matn3O35701 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Matn3O35701 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Matn3O35701 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Matn3O35701 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Matn3O35701 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Matn3O35701 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
Matn3O35701 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Matn3O35701 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Matn3O35701 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Matn3O35701 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Matn3O35701 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.89□□□□□ -0.03
Matn3O35701 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Matn3O35701 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms