Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Npc1O35604 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Npc1O35604 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Npc1O35604 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Npc1O35604 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Npc1O35604 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Npc1O35604 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Npc1O35604 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Npc1O35604 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Npc1O35604 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Npc1O35604 Wnt10b-204ENSMUST00000226655 1807 ntBASIC15.97■□□□□ 0.15
Npc1O35604 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Npc1O35604 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Npc1O35604 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC15.97■□□□□ 0.15
Npc1O35604 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Npc1O35604 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Npc1O35604 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15.97■□□□□ 0.15
Npc1O35604 Gm10459-201ENSMUST00000202708 1155 ntBASIC15.97■□□□□ 0.15
Npc1O35604 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Npc1O35604 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Npc1O35604 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Npc1O35604 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Npc1O35604 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Npc1O35604 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Npc1O35604 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Npc1O35604 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Npc1O35604 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC15.97■□□□□ 0.15
Npc1O35604 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Npc1O35604 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Npc1O35604 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Npc1O35604 Zfp264-201ENSMUST00000208656 1563 ntBASIC15.96■□□□□ 0.15
Npc1O35604 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Npc1O35604 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Npc1O35604 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Npc1O35604 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Npc1O35604 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
Npc1O35604 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Npc1O35604 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Npc1O35604 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Npc1O35604 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Npc1O35604 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Npc1O35604 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Npc1O35604 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Npc1O35604 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Npc1O35604 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Npc1O35604 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC15.96■□□□□ 0.15
Npc1O35604 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC15.96■□□□□ 0.15
Npc1O35604 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
Npc1O35604 Gm27742-201ENSMUST00000184667 60 ntBASIC15.96■□□□□ 0.15
Npc1O35604 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC15.96■□□□□ 0.15
Npc1O35604 Gm18421-201ENSMUST00000204122 625 ntBASIC15.96■□□□□ 0.15
Npc1O35604 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC15.96■□□□□ 0.15
Npc1O35604 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Npc1O35604 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Npc1O35604 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Npc1O35604 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.96■□□□□ 0.14
Npc1O35604 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Npc1O35604 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Npc1O35604 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Npc1O35604 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Npc1O35604 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Npc1O35604 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Npc1O35604 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Npc1O35604 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Npc1O35604 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Npc1O35604 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Npc1O35604 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC15.95■□□□□ 0.14
Npc1O35604 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC15.95■□□□□ 0.14
Npc1O35604 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Npc1O35604 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Npc1O35604 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Npc1O35604 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Npc1O35604 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Npc1O35604 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Npc1O35604 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Npc1O35604 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Npc1O35604 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Npc1O35604 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Npc1O35604 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Npc1O35604 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Npc1O35604 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Npc1O35604 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Npc1O35604 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.95■□□□□ 0.14
Npc1O35604 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Npc1O35604 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Npc1O35604 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15.94■□□□□ 0.14
Npc1O35604 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Npc1O35604 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Npc1O35604 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Npc1O35604 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Npc1O35604 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Npc1O35604 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Npc1O35604 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Npc1O35604 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Npc1O35604 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Npc1O35604 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC15.94■□□□□ 0.14
Npc1O35604 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC15.94■□□□□ 0.14
Npc1O35604 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Npc1O35604 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Npc1O35604 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms