Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfsf11O35235 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC12.82□□□□□ -0.36
Tnfsf11O35235 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfsf11O35235 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfsf11O35235 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfsf11O35235 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfsf11O35235 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Tnfsf11O35235 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfsf11O35235 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC12.82□□□□□ -0.36
Tnfsf11O35235 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfsf11O35235 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfsf11O35235 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Tnfsf11O35235 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfsf11O35235 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfsf11O35235 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfsf11O35235 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfsf11O35235 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Tnfsf11O35235 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfsf11O35235 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Tnfsf11O35235 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfsf11O35235 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfsf11O35235 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfsf11O35235 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfsf11O35235 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfsf11O35235 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfsf11O35235 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfsf11O35235 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfsf11O35235 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfsf11O35235 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfsf11O35235 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfsf11O35235 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfsf11O35235 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfsf11O35235 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfsf11O35235 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfsf11O35235 Gm13148-201ENSMUST00000118892 745 ntBASIC12.81□□□□□ -0.36
Tnfsf11O35235 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfsf11O35235 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC12.81□□□□□ -0.36
Tnfsf11O35235 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC12.81□□□□□ -0.36
Tnfsf11O35235 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfsf11O35235 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfsf11O35235 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfsf11O35235 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfsf11O35235 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfsf11O35235 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfsf11O35235 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfsf11O35235 Asic1-205ENSMUST00000228185 1818 ntBASIC12.81□□□□□ -0.36
Tnfsf11O35235 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Tnfsf11O35235 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfsf11O35235 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfsf11O35235 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfsf11O35235 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfsf11O35235 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Tnfsf11O35235 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfsf11O35235 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfsf11O35235 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC12.8□□□□□ -0.36
Tnfsf11O35235 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Tnfsf11O35235 Gm45560-201ENSMUST00000211492 1472 ntBASIC12.8□□□□□ -0.36
Tnfsf11O35235 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfsf11O35235 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfsf11O35235 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Tnfsf11O35235 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC12.8□□□□□ -0.36
Tnfsf11O35235 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfsf11O35235 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfsf11O35235 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC12.8□□□□□ -0.36
Tnfsf11O35235 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfsf11O35235 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfsf11O35235 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfsf11O35235 Gm27405-201ENSMUST00000184201 112 ntBASIC12.8□□□□□ -0.36
Tnfsf11O35235 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Tnfsf11O35235 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfsf11O35235 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfsf11O35235 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfsf11O35235 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfsf11O35235 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfsf11O35235 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC12.8□□□□□ -0.36
Tnfsf11O35235 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Tnfsf11O35235 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfsf11O35235 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfsf11O35235 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfsf11O35235 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Tnfsf11O35235 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfsf11O35235 CT010444.2-201ENSMUST00000217877 1629 ntBASIC12.8□□□□□ -0.36
Tnfsf11O35235 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfsf11O35235 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfsf11O35235 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Tnfsf11O35235 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC12.8□□□□□ -0.36
Tnfsf11O35235 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfsf11O35235 Ntrk2-205ENSMUST00000224402 2284 ntBASIC12.79□□□□□ -0.36
Tnfsf11O35235 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfsf11O35235 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Tnfsf11O35235 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfsf11O35235 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC12.79□□□□□ -0.36
Tnfsf11O35235 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfsf11O35235 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfsf11O35235 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfsf11O35235 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfsf11O35235 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Tnfsf11O35235 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfsf11O35235 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfsf11O35235 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms