Protein–RNA interactions for Protein: O35118

Gfra3, GDNF family receptor alpha-3, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra3O35118 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gfra3O35118 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gfra3O35118 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gfra3O35118 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Gfra3O35118 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gfra3O35118 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gfra3O35118 Gm11841-201ENSMUST00000117060 1963 ntBASIC14.15□□□□□ -0.14
Gfra3O35118 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gfra3O35118 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC14.15□□□□□ -0.14
Gfra3O35118 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Gfra3O35118 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Gfra3O35118 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gfra3O35118 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Gfra3O35118 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Gfra3O35118 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC14.15□□□□□ -0.14
Gfra3O35118 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gfra3O35118 Gm15442-201ENSMUST00000117905 1527 ntBASIC14.15□□□□□ -0.14
Gfra3O35118 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gfra3O35118 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Gfra3O35118 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Gfra3O35118 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gfra3O35118 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Gfra3O35118 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.15
Gfra3O35118 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gfra3O35118 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gfra3O35118 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Gfra3O35118 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gfra3O35118 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Gfra3O35118 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gfra3O35118 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gfra3O35118 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gfra3O35118 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gfra3O35118 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gfra3O35118 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC14.14□□□□□ -0.15
Gfra3O35118 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC14.14□□□□□ -0.15
Gfra3O35118 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC14.14□□□□□ -0.15
Gfra3O35118 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.14□□□□□ -0.15
Gfra3O35118 AC159205.3-201ENSMUST00000224614 874 ntBASIC14.14□□□□□ -0.15
Gfra3O35118 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gfra3O35118 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Gfra3O35118 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gfra3O35118 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gfra3O35118 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gfra3O35118 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gfra3O35118 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gfra3O35118 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gfra3O35118 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gfra3O35118 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14.13□□□□□ -0.15
Gfra3O35118 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gfra3O35118 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gfra3O35118 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC14.13□□□□□ -0.15
Gfra3O35118 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Gfra3O35118 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.13□□□□□ -0.15
Gfra3O35118 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gfra3O35118 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC14.13□□□□□ -0.15
Gfra3O35118 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC14.13□□□□□ -0.15
Gfra3O35118 Gm17971-201ENSMUST00000190239 806 ntBASIC14.13□□□□□ -0.15
Gfra3O35118 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gfra3O35118 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gfra3O35118 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gfra3O35118 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gfra3O35118 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Gfra3O35118 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gfra3O35118 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Gfra3O35118 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gfra3O35118 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gfra3O35118 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Gfra3O35118 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gfra3O35118 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Gfra3O35118 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gfra3O35118 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gfra3O35118 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC14.12□□□□□ -0.15
Gfra3O35118 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Gfra3O35118 Gm10052-201ENSMUST00000168019 960 ntBASIC14.12□□□□□ -0.15
Gfra3O35118 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC14.12□□□□□ -0.15
Gfra3O35118 AC153937.1-201ENSMUST00000218734 412 ntBASIC14.12□□□□□ -0.15
Gfra3O35118 Gm7729-201ENSMUST00000050143 801 ntBASIC14.12□□□□□ -0.15
Gfra3O35118 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gfra3O35118 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Gfra3O35118 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gfra3O35118 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gfra3O35118 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Gfra3O35118 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gfra3O35118 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gfra3O35118 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Gfra3O35118 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gfra3O35118 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Gfra3O35118 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gfra3O35118 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gfra3O35118 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gfra3O35118 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gfra3O35118 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gfra3O35118 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.11□□□□□ -0.15
Gfra3O35118 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC14.11□□□□□ -0.15
Gfra3O35118 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14.11□□□□□ -0.15
Gfra3O35118 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Gfra3O35118 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC14.11□□□□□ -0.15
Gfra3O35118 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.11□□□□□ -0.15
Gfra3O35118 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC14.11□□□□□ -0.15
Gfra3O35118 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms