Protein–RNA interactions for Protein: O09111

Ndufb11, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial, mousemouse

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufb11O09111 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ndufb11O09111 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC13.2□□□□□ -0.3
Ndufb11O09111 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ndufb11O09111 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ndufb11O09111 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ndufb11O09111 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Ndufb11O09111 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ndufb11O09111 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC13.2□□□□□ -0.3
Ndufb11O09111 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ndufb11O09111 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ndufb11O09111 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ndufb11O09111 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ndufb11O09111 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ndufb11O09111 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.19□□□□□ -0.3
Ndufb11O09111 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ndufb11O09111 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ndufb11O09111 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.19□□□□□ -0.3
Ndufb11O09111 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ndufb11O09111 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ndufb11O09111 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ndufb11O09111 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Ndufb11O09111 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ndufb11O09111 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ndufb11O09111 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ndufb11O09111 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ndufb11O09111 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ndufb11O09111 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ndufb11O09111 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ndufb11O09111 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ndufb11O09111 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ndufb11O09111 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ndufb11O09111 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ndufb11O09111 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Ndufb11O09111 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC13.19□□□□□ -0.3
Ndufb11O09111 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Ndufb11O09111 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ndufb11O09111 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ndufb11O09111 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
Ndufb11O09111 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ndufb11O09111 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ndufb11O09111 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ndufb11O09111 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ndufb11O09111 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ndufb11O09111 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ndufb11O09111 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ndufb11O09111 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ndufb11O09111 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ndufb11O09111 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ndufb11O09111 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Ndufb11O09111 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Ndufb11O09111 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ndufb11O09111 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ndufb11O09111 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ndufb11O09111 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ndufb11O09111 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ndufb11O09111 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ndufb11O09111 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Ndufb11O09111 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ndufb11O09111 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ndufb11O09111 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Ndufb11O09111 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ndufb11O09111 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ndufb11O09111 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ndufb11O09111 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC13.18□□□□□ -0.3
Ndufb11O09111 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ndufb11O09111 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Ndufb11O09111 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Ndufb11O09111 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.18□□□□□ -0.3
Ndufb11O09111 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Ndufb11O09111 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ndufb11O09111 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ndufb11O09111 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ndufb11O09111 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ndufb11O09111 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ndufb11O09111 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC13.17□□□□□ -0.3
Ndufb11O09111 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ndufb11O09111 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ndufb11O09111 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.17□□□□□ -0.3
Ndufb11O09111 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ndufb11O09111 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ndufb11O09111 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ndufb11O09111 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ndufb11O09111 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ndufb11O09111 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ndufb11O09111 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC13.17□□□□□ -0.3
Ndufb11O09111 Gm22238-201ENSMUST00000175222 88 ntBASIC13.17□□□□□ -0.3
Ndufb11O09111 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ndufb11O09111 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ndufb11O09111 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Ndufb11O09111 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ndufb11O09111 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ndufb11O09111 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ndufb11O09111 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Ndufb11O09111 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ndufb11O09111 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ndufb11O09111 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ndufb11O09111 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.16□□□□□ -0.3
Ndufb11O09111 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ndufb11O09111 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ndufb11O09111 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms