Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdh1F7BJK1 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdh1F7BJK1 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdh1F7BJK1 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdh1F7BJK1 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdh1F7BJK1 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdh1F7BJK1 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC14.77□□□□□ -0.05
Pcdh1F7BJK1 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Pcdh1F7BJK1 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
Pcdh1F7BJK1 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdh1F7BJK1 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Pcdh1F7BJK1 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdh1F7BJK1 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdh1F7BJK1 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh1F7BJK1 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.76□□□□□ -0.05
Pcdh1F7BJK1 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Pcdh1F7BJK1 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh1F7BJK1 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh1F7BJK1 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh1F7BJK1 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh1F7BJK1 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh1F7BJK1 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh1F7BJK1 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh1F7BJK1 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh1F7BJK1 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC14.76□□□□□ -0.05
Pcdh1F7BJK1 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh1F7BJK1 Gm10698-201ENSMUST00000182663 604 ntBASIC14.76□□□□□ -0.05
Pcdh1F7BJK1 Spcs1-207ENSMUST00000228767 1008 ntBASIC14.76□□□□□ -0.05
Pcdh1F7BJK1 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh1F7BJK1 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh1F7BJK1 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh1F7BJK1 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Pcdh1F7BJK1 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh1F7BJK1 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh1F7BJK1 Gm7712-202ENSMUST00000222331 1510 ntBASIC14.76□□□□□ -0.05
Pcdh1F7BJK1 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh1F7BJK1 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh1F7BJK1 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh1F7BJK1 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh1F7BJK1 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh1F7BJK1 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh1F7BJK1 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh1F7BJK1 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh1F7BJK1 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh1F7BJK1 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh1F7BJK1 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh1F7BJK1 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh1F7BJK1 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Pcdh1F7BJK1 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh1F7BJK1 Gm18958-201ENSMUST00000174258 762 ntBASIC14.75□□□□□ -0.05
Pcdh1F7BJK1 Gm8520-201ENSMUST00000186517 868 ntBASIC14.75□□□□□ -0.05
Pcdh1F7BJK1 AC159205.3-201ENSMUST00000224614 874 ntBASIC14.75□□□□□ -0.05
Pcdh1F7BJK1 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Pcdh1F7BJK1 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh1F7BJK1 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh1F7BJK1 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Pcdh1F7BJK1 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh1F7BJK1 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh1F7BJK1 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh1F7BJK1 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh1F7BJK1 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
Pcdh1F7BJK1 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh1F7BJK1 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Pcdh1F7BJK1 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh1F7BJK1 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh1F7BJK1 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh1F7BJK1 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh1F7BJK1 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh1F7BJK1 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh1F7BJK1 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdh1F7BJK1 Gm13168-201ENSMUST00000121771 632 ntBASIC14.74□□□□□ -0.05
Pcdh1F7BJK1 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdh1F7BJK1 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdh1F7BJK1 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdh1F7BJK1 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdh1F7BJK1 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdh1F7BJK1 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdh1F7BJK1 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdh1F7BJK1 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdh1F7BJK1 AC154855.1-201ENSMUST00000227353 1458 ntBASIC14.74□□□□□ -0.05
Pcdh1F7BJK1 Gfra2-202ENSMUST00000227633 1480 ntBASIC14.74□□□□□ -0.05
Pcdh1F7BJK1 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdh1F7BJK1 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdh1F7BJK1 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh1F7BJK1 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh1F7BJK1 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh1F7BJK1 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh1F7BJK1 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
Pcdh1F7BJK1 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh1F7BJK1 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh1F7BJK1 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh1F7BJK1 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh1F7BJK1 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh1F7BJK1 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh1F7BJK1 Prob1-201ENSMUST00000097619 3021 ntBASIC14.73□□□□□ -0.05
Pcdh1F7BJK1 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh1F7BJK1 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Pcdh1F7BJK1 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC14.73□□□□□ -0.05
Pcdh1F7BJK1 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh1F7BJK1 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms