Protein–RNA interactions for Protein: F6ZNL5

Pcdh11x, Protocadherin 11 X-linked, mousemouse

Predictions only

Length 1,338 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh11xF6ZNL5 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh11xF6ZNL5 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Pcdh11xF6ZNL5 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh11xF6ZNL5 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh11xF6ZNL5 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Pcdh11xF6ZNL5 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh11xF6ZNL5 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh11xF6ZNL5 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh11xF6ZNL5 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh11xF6ZNL5 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC18.12■□□□□ 0.49
Pcdh11xF6ZNL5 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC18.12■□□□□ 0.49
Pcdh11xF6ZNL5 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh11xF6ZNL5 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh11xF6ZNL5 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh11xF6ZNL5 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh11xF6ZNL5 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh11xF6ZNL5 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh11xF6ZNL5 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh11xF6ZNL5 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh11xF6ZNL5 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh11xF6ZNL5 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh11xF6ZNL5 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Pcdh11xF6ZNL5 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh11xF6ZNL5 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh11xF6ZNL5 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Pcdh11xF6ZNL5 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC18.11■□□□□ 0.49
Pcdh11xF6ZNL5 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh11xF6ZNL5 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh11xF6ZNL5 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Pcdh11xF6ZNL5 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh11xF6ZNL5 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh11xF6ZNL5 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Pcdh11xF6ZNL5 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh11xF6ZNL5 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh11xF6ZNL5 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Pcdh11xF6ZNL5 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Pcdh11xF6ZNL5 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Pcdh11xF6ZNL5 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh11xF6ZNL5 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh11xF6ZNL5 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh11xF6ZNL5 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh11xF6ZNL5 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh11xF6ZNL5 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh11xF6ZNL5 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh11xF6ZNL5 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh11xF6ZNL5 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
Pcdh11xF6ZNL5 Gm32996-201ENSMUST00000199828 1447 ntBASIC18.11■□□□□ 0.49
Pcdh11xF6ZNL5 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh11xF6ZNL5 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh11xF6ZNL5 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh11xF6ZNL5 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh11xF6ZNL5 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh11xF6ZNL5 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh11xF6ZNL5 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Pcdh11xF6ZNL5 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.1■□□□□ 0.49
Pcdh11xF6ZNL5 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh11xF6ZNL5 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
Pcdh11xF6ZNL5 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC18.1■□□□□ 0.49
Pcdh11xF6ZNL5 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh11xF6ZNL5 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC18.1■□□□□ 0.49
Pcdh11xF6ZNL5 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh11xF6ZNL5 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh11xF6ZNL5 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC18.1■□□□□ 0.49
Pcdh11xF6ZNL5 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh11xF6ZNL5 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh11xF6ZNL5 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh11xF6ZNL5 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh11xF6ZNL5 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh11xF6ZNL5 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh11xF6ZNL5 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh11xF6ZNL5 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh11xF6ZNL5 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Pcdh11xF6ZNL5 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh11xF6ZNL5 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh11xF6ZNL5 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh11xF6ZNL5 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh11xF6ZNL5 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh11xF6ZNL5 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC18.09■□□□□ 0.49
Pcdh11xF6ZNL5 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh11xF6ZNL5 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh11xF6ZNL5 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh11xF6ZNL5 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh11xF6ZNL5 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh11xF6ZNL5 Gm9013-201ENSMUST00000132939 882 ntBASIC18.09■□□□□ 0.49
Pcdh11xF6ZNL5 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh11xF6ZNL5 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC18.09■□□□□ 0.49
Pcdh11xF6ZNL5 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh11xF6ZNL5 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh11xF6ZNL5 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh11xF6ZNL5 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh11xF6ZNL5 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh11xF6ZNL5 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh11xF6ZNL5 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh11xF6ZNL5 Gm26917-202ENSMUST00000192833 3329 ntBASIC18.09■□□□□ 0.49
Pcdh11xF6ZNL5 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Pcdh11xF6ZNL5 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdh11xF6ZNL5 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdh11xF6ZNL5 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdh11xF6ZNL5 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdh11xF6ZNL5 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC18.08■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms