Protein–RNA interactions for Protein: B5KM66

Syce3, Synaptonemal complex central element protein 3, mousemouse

Predictions only

Length 88 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syce3B5KM66 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Syce3B5KM66 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Syce3B5KM66 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Syce3B5KM66 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Syce3B5KM66 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Syce3B5KM66 Gm42473-201ENSMUST00000201056 2291 ntBASIC18.81■□□□□ 0.6
Syce3B5KM66 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Syce3B5KM66 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Syce3B5KM66 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Syce3B5KM66 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Syce3B5KM66 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Syce3B5KM66 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Syce3B5KM66 Gm12382-201ENSMUST00000122005 922 ntBASIC18.81■□□□□ 0.6
Syce3B5KM66 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Syce3B5KM66 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.81■□□□□ 0.6
Syce3B5KM66 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Syce3B5KM66 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
Syce3B5KM66 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
Syce3B5KM66 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Syce3B5KM66 Wnt10b-204ENSMUST00000226655 1807 ntBASIC18.81■□□□□ 0.6
Syce3B5KM66 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Syce3B5KM66 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Syce3B5KM66 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Syce3B5KM66 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Syce3B5KM66 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
Syce3B5KM66 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Syce3B5KM66 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Syce3B5KM66 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Syce3B5KM66 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.8■□□□□ 0.6
Syce3B5KM66 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Syce3B5KM66 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
Syce3B5KM66 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Syce3B5KM66 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Syce3B5KM66 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Syce3B5KM66 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Syce3B5KM66 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Syce3B5KM66 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Syce3B5KM66 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Syce3B5KM66 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Syce3B5KM66 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Syce3B5KM66 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Syce3B5KM66 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Syce3B5KM66 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Syce3B5KM66 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Syce3B5KM66 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Syce3B5KM66 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC18.8■□□□□ 0.6
Syce3B5KM66 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Syce3B5KM66 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Syce3B5KM66 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Syce3B5KM66 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Syce3B5KM66 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Syce3B5KM66 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Syce3B5KM66 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC18.79■□□□□ 0.6
Syce3B5KM66 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Syce3B5KM66 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Syce3B5KM66 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Syce3B5KM66 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Syce3B5KM66 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Syce3B5KM66 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Syce3B5KM66 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC18.79■□□□□ 0.6
Syce3B5KM66 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Syce3B5KM66 Gm37025-201ENSMUST00000195159 829 ntBASIC18.79■□□□□ 0.6
Syce3B5KM66 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Syce3B5KM66 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Syce3B5KM66 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Syce3B5KM66 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Syce3B5KM66 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Syce3B5KM66 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
Syce3B5KM66 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Syce3B5KM66 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Syce3B5KM66 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Syce3B5KM66 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Syce3B5KM66 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Syce3B5KM66 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Syce3B5KM66 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
Syce3B5KM66 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Syce3B5KM66 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Syce3B5KM66 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Syce3B5KM66 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Syce3B5KM66 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Syce3B5KM66 Gm13158-201ENSMUST00000122007 736 ntBASIC18.78■□□□□ 0.6
Syce3B5KM66 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.78■□□□□ 0.6
Syce3B5KM66 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC18.78■□□□□ 0.6
Syce3B5KM66 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Syce3B5KM66 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Syce3B5KM66 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Syce3B5KM66 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Syce3B5KM66 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Syce3B5KM66 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Syce3B5KM66 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Syce3B5KM66 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Syce3B5KM66 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Syce3B5KM66 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Syce3B5KM66 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Syce3B5KM66 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.77■□□□□ 0.6
Syce3B5KM66 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC18.77■□□□□ 0.6
Syce3B5KM66 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Syce3B5KM66 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC18.77■□□□□ 0.6
Syce3B5KM66 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Syce3B5KM66 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms