Protein–RNA interactions for Protein: A0A1W2P7H6

Mindy4b-ps, MINDY lysine 48 deubiquitinase 4B, pseudogene, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mindy4b-psA0A1W2P7H6 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.28■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC17.28■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC17.28■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC17.27■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Mindy4b-psA0A1W2P7H6 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Mindy4b-psA0A1W2P7H6 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Mindy4b-psA0A1W2P7H6 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.26■□□□□ 0.35
Mindy4b-psA0A1W2P7H6 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Mindy4b-psA0A1W2P7H6 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mindy4b-psA0A1W2P7H6 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mindy4b-psA0A1W2P7H6 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.26■□□□□ 0.35
Mindy4b-psA0A1W2P7H6 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mindy4b-psA0A1W2P7H6 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mindy4b-psA0A1W2P7H6 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mindy4b-psA0A1W2P7H6 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mindy4b-psA0A1W2P7H6 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mindy4b-psA0A1W2P7H6 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Mindy4b-psA0A1W2P7H6 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mindy4b-psA0A1W2P7H6 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mindy4b-psA0A1W2P7H6 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mindy4b-psA0A1W2P7H6 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mindy4b-psA0A1W2P7H6 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.25■□□□□ 0.35
Mindy4b-psA0A1W2P7H6 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Mindy4b-psA0A1W2P7H6 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Mindy4b-psA0A1W2P7H6 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.25■□□□□ 0.35
Mindy4b-psA0A1W2P7H6 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Mindy4b-psA0A1W2P7H6 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.25■□□□□ 0.35
Mindy4b-psA0A1W2P7H6 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mindy4b-psA0A1W2P7H6 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mindy4b-psA0A1W2P7H6 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Mindy4b-psA0A1W2P7H6 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Mindy4b-psA0A1W2P7H6 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Mindy4b-psA0A1W2P7H6 Gm13312-201ENSMUST00000119631 718 ntBASIC17.25■□□□□ 0.35
Mindy4b-psA0A1W2P7H6 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC17.25■□□□□ 0.35
Mindy4b-psA0A1W2P7H6 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC17.25■□□□□ 0.35
Mindy4b-psA0A1W2P7H6 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mindy4b-psA0A1W2P7H6 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mindy4b-psA0A1W2P7H6 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.25■□□□□ 0.35
Mindy4b-psA0A1W2P7H6 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mindy4b-psA0A1W2P7H6 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mindy4b-psA0A1W2P7H6 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mindy4b-psA0A1W2P7H6 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Mindy4b-psA0A1W2P7H6 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mindy4b-psA0A1W2P7H6 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mindy4b-psA0A1W2P7H6 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mindy4b-psA0A1W2P7H6 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.24■□□□□ 0.35
Mindy4b-psA0A1W2P7H6 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mindy4b-psA0A1W2P7H6 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mindy4b-psA0A1W2P7H6 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mindy4b-psA0A1W2P7H6 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC17.24■□□□□ 0.35
Mindy4b-psA0A1W2P7H6 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mindy4b-psA0A1W2P7H6 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mindy4b-psA0A1W2P7H6 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Mindy4b-psA0A1W2P7H6 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC17.24■□□□□ 0.35
Mindy4b-psA0A1W2P7H6 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mindy4b-psA0A1W2P7H6 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.24■□□□□ 0.35
Mindy4b-psA0A1W2P7H6 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Mindy4b-psA0A1W2P7H6 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mindy4b-psA0A1W2P7H6 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms