Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cfap99A0A140LIX9 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cfap99A0A140LIX9 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Cfap99A0A140LIX9 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cfap99A0A140LIX9 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cfap99A0A140LIX9 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cfap99A0A140LIX9 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Cfap99A0A140LIX9 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cfap99A0A140LIX9 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cfap99A0A140LIX9 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cfap99A0A140LIX9 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cfap99A0A140LIX9 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cfap99A0A140LIX9 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cfap99A0A140LIX9 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cfap99A0A140LIX9 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cfap99A0A140LIX9 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Cfap99A0A140LIX9 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC19.52■□□□□ 0.72
Cfap99A0A140LIX9 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cfap99A0A140LIX9 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Cfap99A0A140LIX9 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cfap99A0A140LIX9 Gm27000-201ENSMUST00000182943 842 ntBASIC19.52■□□□□ 0.72
Cfap99A0A140LIX9 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Cfap99A0A140LIX9 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cfap99A0A140LIX9 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cfap99A0A140LIX9 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Cfap99A0A140LIX9 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Cfap99A0A140LIX9 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Cfap99A0A140LIX9 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Cfap99A0A140LIX9 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Cfap99A0A140LIX9 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cfap99A0A140LIX9 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cfap99A0A140LIX9 Gm8839-201ENSMUST00000121279 1645 ntBASIC19.51■□□□□ 0.71
Cfap99A0A140LIX9 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC19.51■□□□□ 0.71
Cfap99A0A140LIX9 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cfap99A0A140LIX9 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cfap99A0A140LIX9 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cfap99A0A140LIX9 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cfap99A0A140LIX9 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cfap99A0A140LIX9 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cfap99A0A140LIX9 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cfap99A0A140LIX9 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cfap99A0A140LIX9 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cfap99A0A140LIX9 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cfap99A0A140LIX9 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC19.51■□□□□ 0.71
Cfap99A0A140LIX9 Gm13186-201ENSMUST00000118031 316 ntBASIC19.51■□□□□ 0.71
Cfap99A0A140LIX9 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC19.51■□□□□ 0.71
Cfap99A0A140LIX9 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cfap99A0A140LIX9 AC107711.5-202ENSMUST00000226429 702 ntBASIC19.51■□□□□ 0.71
Cfap99A0A140LIX9 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cfap99A0A140LIX9 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Cfap99A0A140LIX9 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cfap99A0A140LIX9 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cfap99A0A140LIX9 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cfap99A0A140LIX9 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC19.51■□□□□ 0.71
Cfap99A0A140LIX9 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cfap99A0A140LIX9 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cfap99A0A140LIX9 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cfap99A0A140LIX9 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cfap99A0A140LIX9 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cfap99A0A140LIX9 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cfap99A0A140LIX9 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cfap99A0A140LIX9 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cfap99A0A140LIX9 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cfap99A0A140LIX9 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cfap99A0A140LIX9 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC19.5■□□□□ 0.71
Cfap99A0A140LIX9 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cfap99A0A140LIX9 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Cfap99A0A140LIX9 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Cfap99A0A140LIX9 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Cfap99A0A140LIX9 AC125350.1-201ENSMUST00000225115 903 ntBASIC19.5■□□□□ 0.71
Cfap99A0A140LIX9 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Cfap99A0A140LIX9 AL590614.2-201ENSMUST00000225374 1937 ntBASIC19.5■□□□□ 0.71
Cfap99A0A140LIX9 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cfap99A0A140LIX9 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cfap99A0A140LIX9 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cfap99A0A140LIX9 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Cfap99A0A140LIX9 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Cfap99A0A140LIX9 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cfap99A0A140LIX9 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cfap99A0A140LIX9 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC19.49■□□□□ 0.71
Cfap99A0A140LIX9 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cfap99A0A140LIX9 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cfap99A0A140LIX9 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cfap99A0A140LIX9 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC19.49■□□□□ 0.71
Cfap99A0A140LIX9 Gm10052-201ENSMUST00000168019 960 ntBASIC19.49■□□□□ 0.71
Cfap99A0A140LIX9 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Cfap99A0A140LIX9 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC19.49■□□□□ 0.71
Cfap99A0A140LIX9 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC19.49■□□□□ 0.71
Cfap99A0A140LIX9 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Cfap99A0A140LIX9 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cfap99A0A140LIX9 Gm7729-201ENSMUST00000050143 801 ntBASIC19.49■□□□□ 0.71
Cfap99A0A140LIX9 Gm5867-201ENSMUST00000063197 592 ntBASIC19.49■□□□□ 0.71
Cfap99A0A140LIX9 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cfap99A0A140LIX9 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cfap99A0A140LIX9 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC19.49■□□□□ 0.71
Cfap99A0A140LIX9 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cfap99A0A140LIX9 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cfap99A0A140LIX9 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cfap99A0A140LIX9 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Cfap99A0A140LIX9 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms