Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Haglr-201ENSMUST00000100000 2085 ntBASIC11.9□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13n-1A0A0G2JEU8 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC11.9□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC11.9□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC11.9□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13n-1A0A0G2JEU8 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Actl10-202ENSMUST00000226583 1501 ntBASIC11.9□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav13n-1A0A0G2JEU8 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav13n-1A0A0G2JEU8 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Trav13n-1A0A0G2JEU8 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13n-1A0A0G2JEU8 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13n-1A0A0G2JEU8 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Trav13n-1A0A0G2JEU8 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13n-1A0A0G2JEU8 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13n-1A0A0G2JEU8 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13n-1A0A0G2JEU8 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Trav13n-1A0A0G2JEU8 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trav13n-1A0A0G2JEU8 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13n-1A0A0G2JEU8 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13n-1A0A0G2JEU8 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13n-1A0A0G2JEU8 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13n-1A0A0G2JEU8 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13n-1A0A0G2JEU8 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13n-1A0A0G2JEU8 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC11.89□□□□□ -0.51
Trav13n-1A0A0G2JEU8 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
Trav13n-1A0A0G2JEU8 Gm10459-201ENSMUST00000202708 1155 ntBASIC11.89□□□□□ -0.51
Trav13n-1A0A0G2JEU8 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Trav13n-1A0A0G2JEU8 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13n-1A0A0G2JEU8 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13n-1A0A0G2JEU8 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13n-1A0A0G2JEU8 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13n-1A0A0G2JEU8 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13n-1A0A0G2JEU8 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trav13n-1A0A0G2JEU8 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13n-1A0A0G2JEU8 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13n-1A0A0G2JEU8 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13n-1A0A0G2JEU8 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13n-1A0A0G2JEU8 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC11.88□□□□□ -0.51
Trav13n-1A0A0G2JEU8 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13n-1A0A0G2JEU8 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13n-1A0A0G2JEU8 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
Trav13n-1A0A0G2JEU8 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC11.88□□□□□ -0.51
Trav13n-1A0A0G2JEU8 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13n-1A0A0G2JEU8 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13n-1A0A0G2JEU8 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13n-1A0A0G2JEU8 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13n-1A0A0G2JEU8 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC11.88□□□□□ -0.51
Trav13n-1A0A0G2JEU8 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC11.88□□□□□ -0.51
Trav13n-1A0A0G2JEU8 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13n-1A0A0G2JEU8 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13n-1A0A0G2JEU8 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13n-1A0A0G2JEU8 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13n-1A0A0G2JEU8 Gm27000-201ENSMUST00000182943 842 ntBASIC11.88□□□□□ -0.51
Trav13n-1A0A0G2JEU8 Gm17808-201ENSMUST00000200859 894 ntBASIC11.88□□□□□ -0.51
Trav13n-1A0A0G2JEU8 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13n-1A0A0G2JEU8 AC122351.1-201ENSMUST00000220467 126 ntBASIC11.88□□□□□ -0.51
Trav13n-1A0A0G2JEU8 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13n-1A0A0G2JEU8 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13n-1A0A0G2JEU8 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC11.88□□□□□ -0.51
Trav13n-1A0A0G2JEU8 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13n-1A0A0G2JEU8 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13n-1A0A0G2JEU8 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13n-1A0A0G2JEU8 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13n-1A0A0G2JEU8 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13n-1A0A0G2JEU8 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13n-1A0A0G2JEU8 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13n-1A0A0G2JEU8 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13n-1A0A0G2JEU8 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13n-1A0A0G2JEU8 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trav13n-1A0A0G2JEU8 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13n-1A0A0G2JEU8 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13n-1A0A0G2JEU8 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13n-1A0A0G2JEU8 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13n-1A0A0G2JEU8 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Trav13n-1A0A0G2JEU8 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13n-1A0A0G2JEU8 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13n-1A0A0G2JEU8 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13n-1A0A0G2JEU8 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13n-1A0A0G2JEU8 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Trav13n-1A0A0G2JEU8 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13n-1A0A0G2JEU8 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms