Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trav3n-3A0A0G2JEM0 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC12.46□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav3n-3A0A0G2JEM0 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav3n-3A0A0G2JEM0 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Mir6349-201ENSMUST00000184059 97 ntBASIC12.45□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav3n-3A0A0G2JEM0 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Trav3n-3A0A0G2JEM0 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC12.45□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Gm43072-201ENSMUST00000200283 1671 ntBASIC12.45□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.44□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Gm10849-201ENSMUST00000100397 618 ntBASIC12.44□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Mir2861-201ENSMUST00000175539 82 ntBASIC12.44□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC12.44□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav3n-3A0A0G2JEM0 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav3n-3A0A0G2JEM0 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC12.43□□□□□ -0.42
Trav3n-3A0A0G2JEM0 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Rab3c-203ENSMUST00000224180 967 ntBASIC12.43□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Gm37736-201ENSMUST00000193564 2802 ntBASIC12.43□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav3n-3A0A0G2JEM0 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav3n-3A0A0G2JEM0 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC12.43□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms