Protein–RNA interactions for Protein: A0A0B4J1J1

Igkv5-45, Immunoglobulin kappa chain variable 5-45 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-45A0A0B4J1J1 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Igkv5-45A0A0B4J1J1 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.7■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC16.7■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.7■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.7■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.7■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.7■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Gm28659-201ENSMUST00000188013 759 ntBASIC16.69■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Gm7506-201ENSMUST00000207758 815 ntBASIC16.69■□□□□ 0.26
Igkv5-45A0A0B4J1J1 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.69■□□□□ 0.26
Igkv5-45A0A0B4J1J1 AC133598.3-202ENSMUST00000224219 531 ntBASIC16.69■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.69■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.68■□□□□ 0.26
Igkv5-45A0A0B4J1J1 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Gm6296-201ENSMUST00000222599 943 ntBASIC16.68■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Igkv5-45A0A0B4J1J1 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Igkv5-45A0A0B4J1J1 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16.67■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC16.67■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Rps4l-201ENSMUST00000071745 943 ntBASIC16.67■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC16.67■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC16.67■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
Igkv5-45A0A0B4J1J1 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.66■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Igkv5-45A0A0B4J1J1 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Igkv5-45A0A0B4J1J1 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.66■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.66■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC16.66■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Igkv5-45A0A0B4J1J1 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms