Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv13-3A0A0B4J1H2 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv13-3A0A0B4J1H2 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC12.81□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC12.81□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Gm7514-201ENSMUST00000209475 934 ntBASIC12.81□□□□□ -0.36
Trbv13-3A0A0B4J1H2 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv13-3A0A0B4J1H2 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC12.8□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv13-3A0A0B4J1H2 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC12.8□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv13-3A0A0B4J1H2 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Gm7291-201ENSMUST00000199147 382 ntBASIC12.79□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC12.79□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC12.79□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv13-3A0A0B4J1H2 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC12.79□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Trbv13-3A0A0B4J1H2 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC12.79□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv13-3A0A0B4J1H2 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Gm44729-201ENSMUST00000206759 2052 ntBASIC12.78□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC12.78□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv13-3A0A0B4J1H2 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Trbv13-3A0A0B4J1H2 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC12.78□□□□□ -0.36
Trbv13-3A0A0B4J1H2 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms