Protein–RNA interactions for Protein: A0A0B4J1G9

Trbv5, T cell receptor beta, variable 5 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv5A0A0B4J1G9 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trbv5A0A0B4J1G9 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trbv5A0A0B4J1G9 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC13.24□□□□□ -0.29
Trbv5A0A0B4J1G9 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trbv5A0A0B4J1G9 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trbv5A0A0B4J1G9 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Trbv5A0A0B4J1G9 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trbv5A0A0B4J1G9 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC13.23□□□□□ -0.29
Trbv5A0A0B4J1G9 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC13.23□□□□□ -0.29
Trbv5A0A0B4J1G9 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trbv5A0A0B4J1G9 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trbv5A0A0B4J1G9 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trbv5A0A0B4J1G9 Asic1-205ENSMUST00000228185 1818 ntBASIC13.23□□□□□ -0.29
Trbv5A0A0B4J1G9 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trbv5A0A0B4J1G9 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trbv5A0A0B4J1G9 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trbv5A0A0B4J1G9 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trbv5A0A0B4J1G9 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trbv5A0A0B4J1G9 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
Trbv5A0A0B4J1G9 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trbv5A0A0B4J1G9 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Trbv5A0A0B4J1G9 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trbv5A0A0B4J1G9 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC13.23□□□□□ -0.29
Trbv5A0A0B4J1G9 AC099934.2-201ENSMUST00000196389 70 ntBASIC13.23□□□□□ -0.29
Trbv5A0A0B4J1G9 AC156953.1-201ENSMUST00000196953 70 ntBASIC13.23□□□□□ -0.29
Trbv5A0A0B4J1G9 AC157822.2-201ENSMUST00000200291 70 ntBASIC13.23□□□□□ -0.29
Trbv5A0A0B4J1G9 Gm44549-201ENSMUST00000208351 577 ntBASIC13.23□□□□□ -0.29
Trbv5A0A0B4J1G9 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC13.23□□□□□ -0.29
Trbv5A0A0B4J1G9 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trbv5A0A0B4J1G9 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trbv5A0A0B4J1G9 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trbv5A0A0B4J1G9 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Trbv5A0A0B4J1G9 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trbv5A0A0B4J1G9 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trbv5A0A0B4J1G9 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trbv5A0A0B4J1G9 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trbv5A0A0B4J1G9 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Trbv5A0A0B4J1G9 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trbv5A0A0B4J1G9 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Trbv5A0A0B4J1G9 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trbv5A0A0B4J1G9 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trbv5A0A0B4J1G9 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv5A0A0B4J1G9 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv5A0A0B4J1G9 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv5A0A0B4J1G9 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv5A0A0B4J1G9 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv5A0A0B4J1G9 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv5A0A0B4J1G9 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv5A0A0B4J1G9 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv5A0A0B4J1G9 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv5A0A0B4J1G9 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv5A0A0B4J1G9 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv5A0A0B4J1G9 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv5A0A0B4J1G9 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv5A0A0B4J1G9 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Trbv5A0A0B4J1G9 Gm11927-201ENSMUST00000118472 759 ntBASIC13.22□□□□□ -0.29
Trbv5A0A0B4J1G9 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv5A0A0B4J1G9 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv5A0A0B4J1G9 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv5A0A0B4J1G9 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv5A0A0B4J1G9 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC13.22□□□□□ -0.29
Trbv5A0A0B4J1G9 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv5A0A0B4J1G9 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv5A0A0B4J1G9 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv5A0A0B4J1G9 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Trbv5A0A0B4J1G9 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv5A0A0B4J1G9 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv5A0A0B4J1G9 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv5A0A0B4J1G9 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
Trbv5A0A0B4J1G9 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
Trbv5A0A0B4J1G9 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv5A0A0B4J1G9 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC13.22□□□□□ -0.29
Trbv5A0A0B4J1G9 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv5A0A0B4J1G9 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv5A0A0B4J1G9 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv5A0A0B4J1G9 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv5A0A0B4J1G9 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv5A0A0B4J1G9 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trbv5A0A0B4J1G9 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC13.21□□□□□ -0.29
Trbv5A0A0B4J1G9 Gm43598-201ENSMUST00000202482 2479 ntBASIC13.21□□□□□ -0.29
Trbv5A0A0B4J1G9 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trbv5A0A0B4J1G9 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trbv5A0A0B4J1G9 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC13.21□□□□□ -0.29
Trbv5A0A0B4J1G9 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC13.21□□□□□ -0.29
Trbv5A0A0B4J1G9 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trbv5A0A0B4J1G9 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
Trbv5A0A0B4J1G9 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trbv5A0A0B4J1G9 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC13.21□□□□□ -0.29
Trbv5A0A0B4J1G9 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Trbv5A0A0B4J1G9 Mir6349-201ENSMUST00000184059 97 ntBASIC13.21□□□□□ -0.29
Trbv5A0A0B4J1G9 Gm18671-201ENSMUST00000214826 683 ntBASIC13.21□□□□□ -0.29
Trbv5A0A0B4J1G9 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trbv5A0A0B4J1G9 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trbv5A0A0B4J1G9 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trbv5A0A0B4J1G9 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trbv5A0A0B4J1G9 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trbv5A0A0B4J1G9 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trbv5A0A0B4J1G9 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trbv5A0A0B4J1G9 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trbv5A0A0B4J1G9 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms