Protein–RNA interactions for Protein: A0A0A6YXG2

Ighv1-56, Immunoglobulin heavy variable 1-56 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-56A0A0A6YXG2 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ighv1-56A0A0A6YXG2 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ighv1-56A0A0A6YXG2 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ighv1-56A0A0A6YXG2 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ighv1-56A0A0A6YXG2 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ighv1-56A0A0A6YXG2 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ighv1-56A0A0A6YXG2 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ighv1-56A0A0A6YXG2 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Ighv1-56A0A0A6YXG2 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ighv1-56A0A0A6YXG2 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ighv1-56A0A0A6YXG2 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC11.03□□□□□ -0.64
Ighv1-56A0A0A6YXG2 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ighv1-56A0A0A6YXG2 Gm43072-201ENSMUST00000200283 1671 ntBASIC11.03□□□□□ -0.64
Ighv1-56A0A0A6YXG2 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ighv1-56A0A0A6YXG2 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ighv1-56A0A0A6YXG2 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ighv1-56A0A0A6YXG2 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ighv1-56A0A0A6YXG2 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ighv1-56A0A0A6YXG2 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ighv1-56A0A0A6YXG2 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC11.03□□□□□ -0.64
Ighv1-56A0A0A6YXG2 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ighv1-56A0A0A6YXG2 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Ighv1-56A0A0A6YXG2 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC11.03□□□□□ -0.64
Ighv1-56A0A0A6YXG2 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC11.03□□□□□ -0.64
Ighv1-56A0A0A6YXG2 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ighv1-56A0A0A6YXG2 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Ighv1-56A0A0A6YXG2 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ighv1-56A0A0A6YXG2 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Ighv1-56A0A0A6YXG2 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ighv1-56A0A0A6YXG2 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ighv1-56A0A0A6YXG2 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Ighv1-56A0A0A6YXG2 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ighv1-56A0A0A6YXG2 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Ighv1-56A0A0A6YXG2 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC11.02□□□□□ -0.64
Ighv1-56A0A0A6YXG2 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Ighv1-56A0A0A6YXG2 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Ighv1-56A0A0A6YXG2 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Ighv1-56A0A0A6YXG2 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Ighv1-56A0A0A6YXG2 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ighv1-56A0A0A6YXG2 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ighv1-56A0A0A6YXG2 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ighv1-56A0A0A6YXG2 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ighv1-56A0A0A6YXG2 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC11.02□□□□□ -0.65
Ighv1-56A0A0A6YXG2 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ighv1-56A0A0A6YXG2 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC11.02□□□□□ -0.65
Ighv1-56A0A0A6YXG2 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Ighv1-56A0A0A6YXG2 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ighv1-56A0A0A6YXG2 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ighv1-56A0A0A6YXG2 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC11.02□□□□□ -0.65
Ighv1-56A0A0A6YXG2 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ighv1-56A0A0A6YXG2 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ighv1-56A0A0A6YXG2 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ighv1-56A0A0A6YXG2 Gm45203-201ENSMUST00000206384 1831 ntBASIC11.02□□□□□ -0.65
Ighv1-56A0A0A6YXG2 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ighv1-56A0A0A6YXG2 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ighv1-56A0A0A6YXG2 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ighv1-56A0A0A6YXG2 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ighv1-56A0A0A6YXG2 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ighv1-56A0A0A6YXG2 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ighv1-56A0A0A6YXG2 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ighv1-56A0A0A6YXG2 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Ighv1-56A0A0A6YXG2 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ighv1-56A0A0A6YXG2 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC11.01□□□□□ -0.65
Ighv1-56A0A0A6YXG2 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ighv1-56A0A0A6YXG2 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ighv1-56A0A0A6YXG2 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ighv1-56A0A0A6YXG2 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ighv1-56A0A0A6YXG2 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Ighv1-56A0A0A6YXG2 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ighv1-56A0A0A6YXG2 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ighv1-56A0A0A6YXG2 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ighv1-56A0A0A6YXG2 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ighv1-56A0A0A6YXG2 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ighv1-56A0A0A6YXG2 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Ighv1-56A0A0A6YXG2 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ighv1-56A0A0A6YXG2 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
Ighv1-56A0A0A6YXG2 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ighv1-56A0A0A6YXG2 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
Ighv1-56A0A0A6YXG2 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ighv1-56A0A0A6YXG2 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ighv1-56A0A0A6YXG2 Mir1199-201ENSMUST00000117015 119 ntBASIC11.01□□□□□ -0.65
Ighv1-56A0A0A6YXG2 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ighv1-56A0A0A6YXG2 Gm13181-201ENSMUST00000120117 1069 ntBASIC11.01□□□□□ -0.65
Ighv1-56A0A0A6YXG2 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ighv1-56A0A0A6YXG2 Gm5297-201ENSMUST00000198555 1171 ntBASIC11.01□□□□□ -0.65
Ighv1-56A0A0A6YXG2 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC11.01□□□□□ -0.65
Ighv1-56A0A0A6YXG2 Timm23-208ENSMUST00000226683 750 ntBASIC11.01□□□□□ -0.65
Ighv1-56A0A0A6YXG2 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ighv1-56A0A0A6YXG2 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ighv1-56A0A0A6YXG2 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ighv1-56A0A0A6YXG2 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ighv1-56A0A0A6YXG2 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ighv1-56A0A0A6YXG2 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ighv1-56A0A0A6YXG2 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Ighv1-56A0A0A6YXG2 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ighv1-56A0A0A6YXG2 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ighv1-56A0A0A6YXG2 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ighv1-56A0A0A6YXG2 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Ighv1-56A0A0A6YXG2 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ighv1-56A0A0A6YXG2 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms