Protein–RNA interactions for Protein: A0A0A6YWQ1

Trbv23, T cell receptor beta, variable V23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv23A0A0A6YWQ1 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.12□□□□□ -0.15
Trbv23A0A0A6YWQ1 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv23A0A0A6YWQ1 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv23A0A0A6YWQ1 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Trbv23A0A0A6YWQ1 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv23A0A0A6YWQ1 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv23A0A0A6YWQ1 Prob1-201ENSMUST00000097619 3021 ntBASIC14.12□□□□□ -0.15
Trbv23A0A0A6YWQ1 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv23A0A0A6YWQ1 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Trbv23A0A0A6YWQ1 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
Trbv23A0A0A6YWQ1 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv23A0A0A6YWQ1 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv23A0A0A6YWQ1 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv23A0A0A6YWQ1 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv23A0A0A6YWQ1 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
Trbv23A0A0A6YWQ1 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv23A0A0A6YWQ1 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv23A0A0A6YWQ1 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv23A0A0A6YWQ1 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.11□□□□□ -0.15
Trbv23A0A0A6YWQ1 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC14.11□□□□□ -0.15
Trbv23A0A0A6YWQ1 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv23A0A0A6YWQ1 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv23A0A0A6YWQ1 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv23A0A0A6YWQ1 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv23A0A0A6YWQ1 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.11□□□□□ -0.15
Trbv23A0A0A6YWQ1 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trbv23A0A0A6YWQ1 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv23A0A0A6YWQ1 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv23A0A0A6YWQ1 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv23A0A0A6YWQ1 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Trbv23A0A0A6YWQ1 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv23A0A0A6YWQ1 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv23A0A0A6YWQ1 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv23A0A0A6YWQ1 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv23A0A0A6YWQ1 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Trbv23A0A0A6YWQ1 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv23A0A0A6YWQ1 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv23A0A0A6YWQ1 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv23A0A0A6YWQ1 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv23A0A0A6YWQ1 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv23A0A0A6YWQ1 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv23A0A0A6YWQ1 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv23A0A0A6YWQ1 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv23A0A0A6YWQ1 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv23A0A0A6YWQ1 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv23A0A0A6YWQ1 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv23A0A0A6YWQ1 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv23A0A0A6YWQ1 AC124581.1-201ENSMUST00000225416 1399 ntBASIC14.1□□□□□ -0.15
Trbv23A0A0A6YWQ1 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv23A0A0A6YWQ1 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trbv23A0A0A6YWQ1 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trbv23A0A0A6YWQ1 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv23A0A0A6YWQ1 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.1□□□□□ -0.15
Trbv23A0A0A6YWQ1 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trbv23A0A0A6YWQ1 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Trbv23A0A0A6YWQ1 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv23A0A0A6YWQ1 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv23A0A0A6YWQ1 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv23A0A0A6YWQ1 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv23A0A0A6YWQ1 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC14.1□□□□□ -0.15
Trbv23A0A0A6YWQ1 Gm13401-201ENSMUST00000117074 291 ntBASIC14.1□□□□□ -0.15
Trbv23A0A0A6YWQ1 Gm10812-201ENSMUST00000099864 546 ntBASIC14.1□□□□□ -0.15
Trbv23A0A0A6YWQ1 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv23A0A0A6YWQ1 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trbv23A0A0A6YWQ1 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv23A0A0A6YWQ1 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv23A0A0A6YWQ1 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.1□□□□□ -0.15
Trbv23A0A0A6YWQ1 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
Trbv23A0A0A6YWQ1 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
Trbv23A0A0A6YWQ1 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trbv23A0A0A6YWQ1 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv23A0A0A6YWQ1 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv23A0A0A6YWQ1 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv23A0A0A6YWQ1 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv23A0A0A6YWQ1 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv23A0A0A6YWQ1 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv23A0A0A6YWQ1 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv23A0A0A6YWQ1 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trbv23A0A0A6YWQ1 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv23A0A0A6YWQ1 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.09□□□□□ -0.15
Trbv23A0A0A6YWQ1 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv23A0A0A6YWQ1 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv23A0A0A6YWQ1 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trbv23A0A0A6YWQ1 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv23A0A0A6YWQ1 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC14.09□□□□□ -0.15
Trbv23A0A0A6YWQ1 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv23A0A0A6YWQ1 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv23A0A0A6YWQ1 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv23A0A0A6YWQ1 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC14.09□□□□□ -0.15
Trbv23A0A0A6YWQ1 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv23A0A0A6YWQ1 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv23A0A0A6YWQ1 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trbv23A0A0A6YWQ1 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.09□□□□□ -0.15
Trbv23A0A0A6YWQ1 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv23A0A0A6YWQ1 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv23A0A0A6YWQ1 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv23A0A0A6YWQ1 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv23A0A0A6YWQ1 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv23A0A0A6YWQ1 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv23A0A0A6YWQ1 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms