Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav8-1A0A075B641 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav8-1A0A075B641 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav8-1A0A075B641 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav8-1A0A075B641 Gm37820-201ENSMUST00000194021 2147 ntBASIC11.81□□□□□ -0.52
Trav8-1A0A075B641 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Trav8-1A0A075B641 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC11.81□□□□□ -0.52
Trav8-1A0A075B641 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav8-1A0A075B641 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav8-1A0A075B641 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav8-1A0A075B641 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trav8-1A0A075B641 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Trav8-1A0A075B641 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC11.81□□□□□ -0.52
Trav8-1A0A075B641 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav8-1A0A075B641 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav8-1A0A075B641 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav8-1A0A075B641 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav8-1A0A075B641 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav8-1A0A075B641 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
Trav8-1A0A075B641 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav8-1A0A075B641 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav8-1A0A075B641 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav8-1A0A075B641 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav8-1A0A075B641 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav8-1A0A075B641 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav8-1A0A075B641 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav8-1A0A075B641 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav8-1A0A075B641 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trav8-1A0A075B641 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav8-1A0A075B641 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav8-1A0A075B641 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav8-1A0A075B641 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
Trav8-1A0A075B641 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav8-1A0A075B641 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav8-1A0A075B641 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav8-1A0A075B641 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav8-1A0A075B641 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Trav8-1A0A075B641 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Trav8-1A0A075B641 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC11.8□□□□□ -0.52
Trav8-1A0A075B641 Tfap2a-209ENSMUST00000225180 1828 ntBASIC11.8□□□□□ -0.52
Trav8-1A0A075B641 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav8-1A0A075B641 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav8-1A0A075B641 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav8-1A0A075B641 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav8-1A0A075B641 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav8-1A0A075B641 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav8-1A0A075B641 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav8-1A0A075B641 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trav8-1A0A075B641 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav8-1A0A075B641 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC11.8□□□□□ -0.52
Trav8-1A0A075B641 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav8-1A0A075B641 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav8-1A0A075B641 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav8-1A0A075B641 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Trav8-1A0A075B641 Gm10676-201ENSMUST00000098778 3221 ntBASIC11.79□□□□□ -0.52
Trav8-1A0A075B641 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav8-1A0A075B641 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav8-1A0A075B641 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav8-1A0A075B641 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav8-1A0A075B641 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav8-1A0A075B641 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav8-1A0A075B641 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav8-1A0A075B641 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav8-1A0A075B641 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav8-1A0A075B641 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav8-1A0A075B641 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav8-1A0A075B641 AC131586.2-201ENSMUST00000228370 1512 ntBASIC11.79□□□□□ -0.52
Trav8-1A0A075B641 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Trav8-1A0A075B641 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav8-1A0A075B641 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Trav8-1A0A075B641 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav8-1A0A075B641 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Trav8-1A0A075B641 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Trav8-1A0A075B641 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav8-1A0A075B641 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav8-1A0A075B641 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC11.79□□□□□ -0.52
Trav8-1A0A075B641 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav8-1A0A075B641 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Trav8-1A0A075B641 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav8-1A0A075B641 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav8-1A0A075B641 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav8-1A0A075B641 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav8-1A0A075B641 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav8-1A0A075B641 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav8-1A0A075B641 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Trav8-1A0A075B641 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav8-1A0A075B641 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav8-1A0A075B641 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav8-1A0A075B641 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav8-1A0A075B641 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav8-1A0A075B641 Gm13234-201ENSMUST00000120010 747 ntBASIC11.78□□□□□ -0.52
Trav8-1A0A075B641 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC11.78□□□□□ -0.52
Trav8-1A0A075B641 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC11.78□□□□□ -0.52
Trav8-1A0A075B641 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC11.78□□□□□ -0.52
Trav8-1A0A075B641 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav8-1A0A075B641 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav8-1A0A075B641 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav8-1A0A075B641 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Trav8-1A0A075B641 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav8-1A0A075B641 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms