Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Trav6-7-dv9A0A075B639 Gm26039-201ENSMUST00000158152 144 ntBASIC14.52□□□□□ -0.09
Trav6-7-dv9A0A075B639 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Trav6-7-dv9A0A075B639 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC14.52□□□□□ -0.09
Trav6-7-dv9A0A075B639 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6-7-dv9A0A075B639 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6-7-dv9A0A075B639 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6-7-dv9A0A075B639 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6-7-dv9A0A075B639 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6-7-dv9A0A075B639 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6-7-dv9A0A075B639 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6-7-dv9A0A075B639 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6-7-dv9A0A075B639 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6-7-dv9A0A075B639 Gm42918-201ENSMUST00000199249 1580 ntBASIC14.51□□□□□ -0.09
Trav6-7-dv9A0A075B639 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-7-dv9A0A075B639 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-7-dv9A0A075B639 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-7-dv9A0A075B639 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-7-dv9A0A075B639 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-7-dv9A0A075B639 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Trav6-7-dv9A0A075B639 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC14.51□□□□□ -0.09
Trav6-7-dv9A0A075B639 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC14.51□□□□□ -0.09
Trav6-7-dv9A0A075B639 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-7-dv9A0A075B639 Gm7889-201ENSMUST00000185591 958 ntBASIC14.51□□□□□ -0.09
Trav6-7-dv9A0A075B639 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC14.51□□□□□ -0.09
Trav6-7-dv9A0A075B639 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-7-dv9A0A075B639 AC134329.2-201ENSMUST00000217897 428 ntBASIC14.51□□□□□ -0.09
Trav6-7-dv9A0A075B639 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-7-dv9A0A075B639 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-7-dv9A0A075B639 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC14.51□□□□□ -0.09
Trav6-7-dv9A0A075B639 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.51□□□□□ -0.09
Trav6-7-dv9A0A075B639 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-7-dv9A0A075B639 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-7-dv9A0A075B639 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-7-dv9A0A075B639 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-7-dv9A0A075B639 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-7-dv9A0A075B639 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-7-dv9A0A075B639 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-7-dv9A0A075B639 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-7-dv9A0A075B639 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Trav6-7-dv9A0A075B639 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-7-dv9A0A075B639 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-7-dv9A0A075B639 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC14.5□□□□□ -0.09
Trav6-7-dv9A0A075B639 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC14.5□□□□□ -0.09
Trav6-7-dv9A0A075B639 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-7-dv9A0A075B639 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-7-dv9A0A075B639 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Trav6-7-dv9A0A075B639 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-7-dv9A0A075B639 Gm43799-201ENSMUST00000201845 579 ntBASIC14.5□□□□□ -0.09
Trav6-7-dv9A0A075B639 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC14.5□□□□□ -0.09
Trav6-7-dv9A0A075B639 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-7-dv9A0A075B639 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Trav6-7-dv9A0A075B639 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-7-dv9A0A075B639 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-7-dv9A0A075B639 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Trav6-7-dv9A0A075B639 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-7-dv9A0A075B639 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-7-dv9A0A075B639 Hivep3-201ENSMUST00000084306 2973 ntBASIC14.5□□□□□ -0.09
Trav6-7-dv9A0A075B639 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-7-dv9A0A075B639 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-7-dv9A0A075B639 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Trav6-7-dv9A0A075B639 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-7-dv9A0A075B639 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-7-dv9A0A075B639 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-7-dv9A0A075B639 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Trav6-7-dv9A0A075B639 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-7-dv9A0A075B639 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-7-dv9A0A075B639 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-7-dv9A0A075B639 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.49□□□□□ -0.09
Trav6-7-dv9A0A075B639 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-7-dv9A0A075B639 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.49□□□□□ -0.09
Trav6-7-dv9A0A075B639 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-7-dv9A0A075B639 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-7-dv9A0A075B639 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-7-dv9A0A075B639 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-7-dv9A0A075B639 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC14.49□□□□□ -0.09
Trav6-7-dv9A0A075B639 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC14.49□□□□□ -0.09
Trav6-7-dv9A0A075B639 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC14.49□□□□□ -0.09
Trav6-7-dv9A0A075B639 Gm3272-201ENSMUST00000181181 1229 ntBASIC14.49□□□□□ -0.09
Trav6-7-dv9A0A075B639 Gm27389-201ENSMUST00000183622 195 ntBASIC14.49□□□□□ -0.09
Trav6-7-dv9A0A075B639 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC14.49□□□□□ -0.09
Trav6-7-dv9A0A075B639 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-7-dv9A0A075B639 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-7-dv9A0A075B639 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-7-dv9A0A075B639 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Trav6-7-dv9A0A075B639 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Trav6-7-dv9A0A075B639 Gm10566-201ENSMUST00000086739 996 ntBASIC14.49□□□□□ -0.09
Trav6-7-dv9A0A075B639 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-7-dv9A0A075B639 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-7-dv9A0A075B639 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-7-dv9A0A075B639 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-7-dv9A0A075B639 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Trav6-7-dv9A0A075B639 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-7-dv9A0A075B639 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-7-dv9A0A075B639 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-7-dv9A0A075B639 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-7-dv9A0A075B639 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Trav6-7-dv9A0A075B639 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6-7-dv9A0A075B639 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6-7-dv9A0A075B639 Gm26917-202ENSMUST00000192833 3329 ntBASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms