Protein–RNA interactions for Protein: A0A075B626

Trav12n-2, T cell receptor alpha variable 12D-2, mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12n-2A0A075B626 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
Trav12n-2A0A075B626 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav12n-2A0A075B626 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav12n-2A0A075B626 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Trav12n-2A0A075B626 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Trav12n-2A0A075B626 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav12n-2A0A075B626 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav12n-2A0A075B626 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav12n-2A0A075B626 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav12n-2A0A075B626 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC14.69□□□□□ -0.06
Trav12n-2A0A075B626 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.68□□□□□ -0.06
Trav12n-2A0A075B626 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav12n-2A0A075B626 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav12n-2A0A075B626 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav12n-2A0A075B626 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav12n-2A0A075B626 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav12n-2A0A075B626 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav12n-2A0A075B626 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav12n-2A0A075B626 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav12n-2A0A075B626 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav12n-2A0A075B626 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav12n-2A0A075B626 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav12n-2A0A075B626 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav12n-2A0A075B626 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav12n-2A0A075B626 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav12n-2A0A075B626 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav12n-2A0A075B626 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC14.68□□□□□ -0.06
Trav12n-2A0A075B626 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Trav12n-2A0A075B626 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC14.68□□□□□ -0.06
Trav12n-2A0A075B626 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav12n-2A0A075B626 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav12n-2A0A075B626 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav12n-2A0A075B626 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav12n-2A0A075B626 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav12n-2A0A075B626 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav12n-2A0A075B626 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav12n-2A0A075B626 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Trav12n-2A0A075B626 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav12n-2A0A075B626 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav12n-2A0A075B626 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav12n-2A0A075B626 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav12n-2A0A075B626 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Trav12n-2A0A075B626 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Trav12n-2A0A075B626 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav12n-2A0A075B626 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Trav12n-2A0A075B626 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav12n-2A0A075B626 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Trav12n-2A0A075B626 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav12n-2A0A075B626 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav12n-2A0A075B626 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav12n-2A0A075B626 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav12n-2A0A075B626 AC130671.1-201ENSMUST00000227384 1237 ntBASIC14.67□□□□□ -0.06
Trav12n-2A0A075B626 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav12n-2A0A075B626 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav12n-2A0A075B626 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav12n-2A0A075B626 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav12n-2A0A075B626 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav12n-2A0A075B626 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Trav12n-2A0A075B626 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav12n-2A0A075B626 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav12n-2A0A075B626 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav12n-2A0A075B626 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav12n-2A0A075B626 Gm32996-201ENSMUST00000199828 1447 ntBASIC14.66□□□□□ -0.06
Trav12n-2A0A075B626 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.66□□□□□ -0.06
Trav12n-2A0A075B626 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav12n-2A0A075B626 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav12n-2A0A075B626 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav12n-2A0A075B626 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav12n-2A0A075B626 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav12n-2A0A075B626 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav12n-2A0A075B626 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav12n-2A0A075B626 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav12n-2A0A075B626 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav12n-2A0A075B626 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC14.66□□□□□ -0.06
Trav12n-2A0A075B626 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav12n-2A0A075B626 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav12n-2A0A075B626 Olfr129-201ENSMUST00000122318 993 ntBASIC14.66□□□□□ -0.06
Trav12n-2A0A075B626 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav12n-2A0A075B626 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav12n-2A0A075B626 Gm21362-201ENSMUST00000194272 928 ntBASIC14.66□□□□□ -0.06
Trav12n-2A0A075B626 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav12n-2A0A075B626 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav12n-2A0A075B626 Gm7367-201ENSMUST00000057611 492 ntBASIC14.66□□□□□ -0.06
Trav12n-2A0A075B626 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trav12n-2A0A075B626 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav12n-2A0A075B626 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav12n-2A0A075B626 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav12n-2A0A075B626 Gm15743-202ENSMUST00000182690 1901 ntBASIC14.66□□□□□ -0.06
Trav12n-2A0A075B626 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav12n-2A0A075B626 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Trav12n-2A0A075B626 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Trav12n-2A0A075B626 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC14.66□□□□□ -0.06
Trav12n-2A0A075B626 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav12n-2A0A075B626 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav12n-2A0A075B626 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav12n-2A0A075B626 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav12n-2A0A075B626 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav12n-2A0A075B626 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Trav12n-2A0A075B626 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav12n-2A0A075B626 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms