Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Gm7638-201ENSMUST00000121348 967 ntBASIC13.96□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC13.96□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 AC120002.2-201ENSMUST00000220205 773 ntBASIC13.96□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Il3ra-202ENSMUST00000223589 738 ntBASIC13.96□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav15d-1-dv6d-1A0A075B624 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Gm45203-201ENSMUST00000206384 1831 ntBASIC13.95□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC13.95□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC13.95□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC13.95□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC13.95□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC13.95□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC13.94□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC13.94□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Gm15378-201ENSMUST00000121894 207 ntBASIC13.94□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC13.94□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC13.94□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC13.94□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Gm12085-201ENSMUST00000119263 940 ntBASIC13.93□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Gm12441-201ENSMUST00000121806 588 ntBASIC13.93□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Trmt13-210ENSMUST00000198454 880 ntBASIC13.93□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms