Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav4n-4A0A075B615 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav4n-4A0A075B615 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav4n-4A0A075B615 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC11.41□□□□□ -0.58
Trav4n-4A0A075B615 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Trav4n-4A0A075B615 Wdr70-203ENSMUST00000227371 1130 ntBASIC11.41□□□□□ -0.58
Trav4n-4A0A075B615 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav4n-4A0A075B615 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Trav4n-4A0A075B615 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav4n-4A0A075B615 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav4n-4A0A075B615 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav4n-4A0A075B615 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav4n-4A0A075B615 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav4n-4A0A075B615 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav4n-4A0A075B615 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav4n-4A0A075B615 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav4n-4A0A075B615 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Trav4n-4A0A075B615 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav4n-4A0A075B615 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Trav4n-4A0A075B615 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav4n-4A0A075B615 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Trav4n-4A0A075B615 Gm10584-201ENSMUST00000207036 2628 ntBASIC11.4□□□□□ -0.58
Trav4n-4A0A075B615 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav4n-4A0A075B615 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav4n-4A0A075B615 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav4n-4A0A075B615 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav4n-4A0A075B615 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC11.4□□□□□ -0.58
Trav4n-4A0A075B615 AC163637.1-201ENSMUST00000215491 1894 ntBASIC11.4□□□□□ -0.58
Trav4n-4A0A075B615 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav4n-4A0A075B615 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
Trav4n-4A0A075B615 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav4n-4A0A075B615 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav4n-4A0A075B615 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav4n-4A0A075B615 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav4n-4A0A075B615 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav4n-4A0A075B615 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav4n-4A0A075B615 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav4n-4A0A075B615 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav4n-4A0A075B615 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav4n-4A0A075B615 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav4n-4A0A075B615 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav4n-4A0A075B615 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav4n-4A0A075B615 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav4n-4A0A075B615 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Trav4n-4A0A075B615 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Trav4n-4A0A075B615 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav4n-4A0A075B615 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC11.4□□□□□ -0.58
Trav4n-4A0A075B615 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC11.4□□□□□ -0.58
Trav4n-4A0A075B615 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav4n-4A0A075B615 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
Trav4n-4A0A075B615 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav4n-4A0A075B615 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav4n-4A0A075B615 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Trav4n-4A0A075B615 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC11.4□□□□□ -0.59
Trav4n-4A0A075B615 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav4n-4A0A075B615 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Trav4n-4A0A075B615 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Trav4n-4A0A075B615 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC11.39□□□□□ -0.59
Trav4n-4A0A075B615 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav4n-4A0A075B615 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav4n-4A0A075B615 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav4n-4A0A075B615 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav4n-4A0A075B615 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav4n-4A0A075B615 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav4n-4A0A075B615 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav4n-4A0A075B615 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav4n-4A0A075B615 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav4n-4A0A075B615 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav4n-4A0A075B615 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC11.39□□□□□ -0.59
Trav4n-4A0A075B615 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav4n-4A0A075B615 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Trav4n-4A0A075B615 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Trav4n-4A0A075B615 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav4n-4A0A075B615 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Trav4n-4A0A075B615 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav4n-4A0A075B615 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav4n-4A0A075B615 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Trav4n-4A0A075B615 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav4n-4A0A075B615 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav4n-4A0A075B615 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav4n-4A0A075B615 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav4n-4A0A075B615 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav4n-4A0A075B615 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav4n-4A0A075B615 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav4n-4A0A075B615 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC11.39□□□□□ -0.59
Trav4n-4A0A075B615 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav4n-4A0A075B615 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav4n-4A0A075B615 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Trav4n-4A0A075B615 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav4n-4A0A075B615 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Trav4n-4A0A075B615 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav4n-4A0A075B615 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav4n-4A0A075B615 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav4n-4A0A075B615 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav4n-4A0A075B615 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Trav4n-4A0A075B615 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav4n-4A0A075B615 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC11.38□□□□□ -0.59
Trav4n-4A0A075B615 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav4n-4A0A075B615 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav4n-4A0A075B615 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms