Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-6A0A075B603 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-6A0A075B603 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-6A0A075B603 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Trav6-6A0A075B603 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-6A0A075B603 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC12.25□□□□□ -0.45
Trav6-6A0A075B603 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-6A0A075B603 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-6A0A075B603 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC12.25□□□□□ -0.45
Trav6-6A0A075B603 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-6A0A075B603 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-6A0A075B603 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
Trav6-6A0A075B603 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-6A0A075B603 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trav6-6A0A075B603 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-6A0A075B603 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-6A0A075B603 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-6A0A075B603 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-6A0A075B603 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC12.25□□□□□ -0.45
Trav6-6A0A075B603 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC12.25□□□□□ -0.45
Trav6-6A0A075B603 Gm18025-201ENSMUST00000221733 862 ntBASIC12.25□□□□□ -0.45
Trav6-6A0A075B603 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-6A0A075B603 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-6A0A075B603 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-6A0A075B603 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-6A0A075B603 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-6A0A075B603 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-6A0A075B603 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trav6-6A0A075B603 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-6A0A075B603 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-6A0A075B603 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-6A0A075B603 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-6A0A075B603 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-6A0A075B603 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC12.25□□□□□ -0.45
Trav6-6A0A075B603 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trav6-6A0A075B603 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6-6A0A075B603 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-6A0A075B603 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-6A0A075B603 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-6A0A075B603 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-6A0A075B603 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC12.24□□□□□ -0.45
Trav6-6A0A075B603 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-6A0A075B603 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-6A0A075B603 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC12.24□□□□□ -0.45
Trav6-6A0A075B603 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
Trav6-6A0A075B603 Gm12441-201ENSMUST00000121806 588 ntBASIC12.24□□□□□ -0.45
Trav6-6A0A075B603 Gm12382-201ENSMUST00000122005 922 ntBASIC12.24□□□□□ -0.45
Trav6-6A0A075B603 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-6A0A075B603 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-6A0A075B603 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-6A0A075B603 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Trav6-6A0A075B603 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-6A0A075B603 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-6A0A075B603 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
Trav6-6A0A075B603 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-6A0A075B603 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-6A0A075B603 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-6A0A075B603 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-6A0A075B603 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-6A0A075B603 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-6A0A075B603 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-6A0A075B603 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-6A0A075B603 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-6A0A075B603 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-6A0A075B603 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-6A0A075B603 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav6-6A0A075B603 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Trav6-6A0A075B603 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Trav6-6A0A075B603 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trav6-6A0A075B603 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-6A0A075B603 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-6A0A075B603 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC12.23□□□□□ -0.45
Trav6-6A0A075B603 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Trav6-6A0A075B603 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-6A0A075B603 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-6A0A075B603 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-6A0A075B603 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-6A0A075B603 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-6A0A075B603 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav6-6A0A075B603 Gm4974-201ENSMUST00000209974 875 ntBASIC12.23□□□□□ -0.45
Trav6-6A0A075B603 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-6A0A075B603 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-6A0A075B603 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-6A0A075B603 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-6A0A075B603 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-6A0A075B603 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-6A0A075B603 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trav6-6A0A075B603 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trav6-6A0A075B603 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-6A0A075B603 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-6A0A075B603 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-6A0A075B603 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-6A0A075B603 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-6A0A075B603 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-6A0A075B603 Prob1-201ENSMUST00000097619 3021 ntBASIC12.22□□□□□ -0.45
Trav6-6A0A075B603 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC12.22□□□□□ -0.45
Trav6-6A0A075B603 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-6A0A075B603 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Trav6-6A0A075B603 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-6A0A075B603 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms