Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 RNU6-712P-201ENST00000410558 100 ntBASIC2.77□□□□□ -1.97
VAPAQ9P0L0 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.77□□□□□ -1.97
VAPAQ9P0L0 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.77□□□□□ -1.97
VAPAQ9P0L0 AC009237.2-201ENST00000421358 284 ntBASIC2.77□□□□□ -1.97
VAPAQ9P0L0 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
VAPAQ9P0L0 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC2.77□□□□□ -1.97
VAPAQ9P0L0 DUTP6-201ENST00000425573 462 ntBASIC2.77□□□□□ -1.97
VAPAQ9P0L0 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.77□□□□□ -1.97
VAPAQ9P0L0 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.77□□□□□ -1.97
VAPAQ9P0L0 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC2.77□□□□□ -1.97
VAPAQ9P0L0 SNRPEP4-201ENST00000435815 279 ntBASIC2.77□□□□□ -1.97
VAPAQ9P0L0 AL929288.2-201ENST00000446368 407 ntBASIC2.77□□□□□ -1.97
VAPAQ9P0L0 AC005002.1-201ENST00000447458 540 ntBASIC2.77□□□□□ -1.97
VAPAQ9P0L0 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.77□□□□□ -1.97
VAPAQ9P0L0 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC2.77□□□□□ -1.97
VAPAQ9P0L0 DYNLL1P6-201ENST00000503440 264 ntBASIC2.77□□□□□ -1.97
VAPAQ9P0L0 KLHL2P1-201ENST00000508691 521 ntBASIC2.77□□□□□ -1.97
VAPAQ9P0L0 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
VAPAQ9P0L0 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.77□□□□□ -1.97
VAPAQ9P0L0 RN7SKP157-201ENST00000516174 282 ntBASIC2.77□□□□□ -1.97
VAPAQ9P0L0 RNU4ATAC10P-201ENST00000516967 122 ntBASIC2.77□□□□□ -1.97
VAPAQ9P0L0 ERHP1-201ENST00000523006 310 ntBASIC2.77□□□□□ -1.97
VAPAQ9P0L0 AP000857.1-201ENST00000532151 543 ntBASIC2.77□□□□□ -1.97
VAPAQ9P0L0 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC2.77□□□□□ -1.97
VAPAQ9P0L0 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.77□□□□□ -1.97
VAPAQ9P0L0 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC2.77□□□□□ -1.97
VAPAQ9P0L0 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.77□□□□□ -1.97
VAPAQ9P0L0 AC006329.2-201ENST00000611491 394 ntBASIC2.77□□□□□ -1.97
VAPAQ9P0L0 AC107871.2-201ENST00000612894 502 ntBASIC2.77□□□□□ -1.97
VAPAQ9P0L0 AL355810.1-201ENST00000614629 552 ntBASIC2.77□□□□□ -1.97
VAPAQ9P0L0 AC104307.1-201ENST00000616142 196 ntBASIC2.77□□□□□ -1.97
VAPAQ9P0L0 AC002076.2-201ENST00000617362 122 ntBASIC2.77□□□□□ -1.97
VAPAQ9P0L0 AC073348.1-201ENST00000623002 331 ntBASIC2.77□□□□□ -1.97
VAPAQ9P0L0 AC009039.2-201ENST00000624524 529 ntBASIC2.77□□□□□ -1.97
VAPAQ9P0L0 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.77□□□□□ -1.97
VAPAQ9P0L0 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
VAPAQ9P0L0 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.77□□□□□ -1.97
VAPAQ9P0L0 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
VAPAQ9P0L0 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
VAPAQ9P0L0 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.76□□□□□ -1.97
VAPAQ9P0L0 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
VAPAQ9P0L0 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.76□□□□□ -1.97
VAPAQ9P0L0 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
VAPAQ9P0L0 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
VAPAQ9P0L0 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
VAPAQ9P0L0 Y_RNA.126-201ENST00000363382 111 ntBASIC2.76□□□□□ -1.97
VAPAQ9P0L0 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC2.76□□□□□ -1.97
VAPAQ9P0L0 MIR200C-201ENST00000384980 68 ntBASIC2.76□□□□□ -1.97
VAPAQ9P0L0 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.76□□□□□ -1.97
VAPAQ9P0L0 AC233981.1-201ENST00000423224 461 ntBASIC2.76□□□□□ -1.97
VAPAQ9P0L0 MTATP6P4-201ENST00000427725 675 ntBASIC2.76□□□□□ -1.97
VAPAQ9P0L0 OFD1P12Y-201ENST00000427963 1207 ntBASIC2.76□□□□□ -1.97
VAPAQ9P0L0 OFD1P13Y-201ENST00000431179 1232 ntBASIC2.76□□□□□ -1.97
VAPAQ9P0L0 AC127537.2-201ENST00000439258 465 ntBASIC2.76□□□□□ -1.97
VAPAQ9P0L0 AC004022.1-201ENST00000447766 1066 ntBASIC2.76□□□□□ -1.97
VAPAQ9P0L0 RPL37P4-201ENST00000448908 268 ntBASIC2.76□□□□□ -1.97
VAPAQ9P0L0 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC2.76□□□□□ -1.97
VAPAQ9P0L0 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC2.76□□□□□ -1.97
VAPAQ9P0L0 AC020898.1-201ENST00000474167 787 ntBASIC2.76□□□□□ -1.97
VAPAQ9P0L0 RN7SL499P-201ENST00000481141 276 ntBASIC2.76□□□□□ -1.97
VAPAQ9P0L0 AC096751.1-202ENST00000502691 1067 ntBASIC2.76□□□□□ -1.97
VAPAQ9P0L0 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.76□□□□□ -1.97
VAPAQ9P0L0 SAP18P1-201ENST00000512058 390 ntBASIC2.76□□□□□ -1.97
VAPAQ9P0L0 RNU6-416P-201ENST00000516265 103 ntBASIC2.76□□□□□ -1.97
VAPAQ9P0L0 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC2.76□□□□□ -1.97
VAPAQ9P0L0 SNRPGP16-201ENST00000533275 226 ntBASIC2.76□□□□□ -1.97
VAPAQ9P0L0 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.76□□□□□ -1.97
VAPAQ9P0L0 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC2.76□□□□□ -1.97
VAPAQ9P0L0 AL020997.3-201ENST00000602843 359 ntBASIC2.76□□□□□ -1.97
VAPAQ9P0L0 AC015871.2-201ENST00000603605 948 ntBASIC2.76□□□□□ -1.97
VAPAQ9P0L0 AC073387.2-201ENST00000604797 784 ntBASIC2.76□□□□□ -1.97
VAPAQ9P0L0 AC090115.4-201ENST00000609970 188 ntBASIC2.76□□□□□ -1.97
VAPAQ9P0L0 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC2.76□□□□□ -1.97
VAPAQ9P0L0 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
VAPAQ9P0L0 MIR7112-201ENST00000616126 65 ntBASIC2.76□□□□□ -1.97
VAPAQ9P0L0 AL355493.4-201ENST00000618530 292 ntBASIC2.76□□□□□ -1.97
VAPAQ9P0L0 AC010338.1-201ENST00000621823 717 ntBASIC2.76□□□□□ -1.97
VAPAQ9P0L0 AC091953.5-201ENST00000622919 233 ntBASIC2.76□□□□□ -1.97
VAPAQ9P0L0 AC026422.1-201ENST00000623961 452 ntBASIC2.76□□□□□ -1.97
VAPAQ9P0L0 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.76□□□□□ -1.97
VAPAQ9P0L0 LRRC77P-213ENST00000637727 880 ntBASIC2.76□□□□□ -1.97
VAPAQ9P0L0 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
VAPAQ9P0L0 AC244517.1-201ENST00000606030 2086 ntBASIC2.76□□□□□ -1.97
VAPAQ9P0L0 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
VAPAQ9P0L0 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.76□□□□□ -1.97
VAPAQ9P0L0 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.76□□□□□ -1.97
VAPAQ9P0L0 SGO1P2-201ENST00000429458 1589 ntBASIC2.75□□□□□ -1.97
VAPAQ9P0L0 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
VAPAQ9P0L0 RNU6-730P-201ENST00000383954 104 ntBASIC2.75□□□□□ -1.97
VAPAQ9P0L0 RPS3AP26-201ENST00000398259 784 ntBASIC2.75□□□□□ -1.97
VAPAQ9P0L0 SNORD88.1-201ENST00000408684 91 ntBASIC2.75□□□□□ -1.97
VAPAQ9P0L0 RN7SKP220-201ENST00000410611 288 ntBASIC2.75□□□□□ -1.97
VAPAQ9P0L0 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.75□□□□□ -1.97
VAPAQ9P0L0 AL009174.1-201ENST00000426577 416 ntBASIC2.75□□□□□ -1.97
VAPAQ9P0L0 AC109583.1-201ENST00000432156 268 ntBASIC2.75□□□□□ -1.97
VAPAQ9P0L0 KCTD10P1-201ENST00000434203 625 ntBASIC2.75□□□□□ -1.97
VAPAQ9P0L0 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.75□□□□□ -1.97
VAPAQ9P0L0 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.75□□□□□ -1.97
VAPAQ9P0L0 AC006028.1-201ENST00000438379 402 ntBASIC2.75□□□□□ -1.97
VAPAQ9P0L0 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms