Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.92□□□□□ -1.78
SMARCAL1Q9NZC9 MTND4LP31-201ENST00000514859 294 ntBASIC3.92□□□□□ -1.78
SMARCAL1Q9NZC9 RNU6-583P-201ENST00000516012 92 ntBASIC3.92□□□□□ -1.78
SMARCAL1Q9NZC9 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC3.92□□□□□ -1.78
SMARCAL1Q9NZC9 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.92□□□□□ -1.78
SMARCAL1Q9NZC9 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC3.92□□□□□ -1.78
SMARCAL1Q9NZC9 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC3.92□□□□□ -1.78
SMARCAL1Q9NZC9 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.92□□□□□ -1.78
SMARCAL1Q9NZC9 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.92□□□□□ -1.78
SMARCAL1Q9NZC9 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.92□□□□□ -1.78
SMARCAL1Q9NZC9 GTF2IP22-201ENST00000554443 182 ntBASIC3.92□□□□□ -1.78
SMARCAL1Q9NZC9 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.92□□□□□ -1.78
SMARCAL1Q9NZC9 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC3.92□□□□□ -1.78
SMARCAL1Q9NZC9 AC136624.4-201ENST00000573044 370 ntBASIC3.92□□□□□ -1.78
SMARCAL1Q9NZC9 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.92□□□□□ -1.78
SMARCAL1Q9NZC9 AP001180.3-201ENST00000582221 145 ntBASIC3.92□□□□□ -1.78
SMARCAL1Q9NZC9 AC107982.3-201ENST00000584957 985 ntBASIC3.92□□□□□ -1.78
SMARCAL1Q9NZC9 AC022146.1-201ENST00000595307 847 ntBASIC3.92□□□□□ -1.78
SMARCAL1Q9NZC9 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.92□□□□□ -1.78
SMARCAL1Q9NZC9 AC099669.2-201ENST00000616549 437 ntBASIC3.92□□□□□ -1.78
SMARCAL1Q9NZC9 ZYXP1-201ENST00000617638 118 ntBASIC3.92□□□□□ -1.78
SMARCAL1Q9NZC9 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.92□□□□□ -1.78
SMARCAL1Q9NZC9 AC007656.2-201ENST00000624902 4547 ntBASIC3.92□□□□□ -1.78
SMARCAL1Q9NZC9 AC107081.3-201ENST00000612715 2034 ntBASIC3.92□□□□□ -1.78
SMARCAL1Q9NZC9 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SMARCAL1Q9NZC9 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SMARCAL1Q9NZC9 MTND4P5-201ENST00000435821 1374 ntBASIC3.91□□□□□ -1.78
SMARCAL1Q9NZC9 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.91□□□□□ -1.78
SMARCAL1Q9NZC9 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
SMARCAL1Q9NZC9 OR4A15-201ENST00000314706 1035 ntBASIC3.91□□□□□ -1.78
SMARCAL1Q9NZC9 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SMARCAL1Q9NZC9 MIR372-201ENST00000362225 67 ntBASIC3.91□□□□□ -1.78
SMARCAL1Q9NZC9 RNU1-85P-201ENST00000364127 164 ntBASIC3.91□□□□□ -1.78
SMARCAL1Q9NZC9 Y_RNA.553-201ENST00000384670 102 ntBASIC3.91□□□□□ -1.78
SMARCAL1Q9NZC9 SNRPEP2-201ENST00000397592 279 ntBASIC3.91□□□□□ -1.78
SMARCAL1Q9NZC9 RN7SKP142-201ENST00000411236 328 ntBASIC3.91□□□□□ -1.78
SMARCAL1Q9NZC9 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.91□□□□□ -1.78
SMARCAL1Q9NZC9 AC127526.1-201ENST00000417526 366 ntBASIC3.91□□□□□ -1.78
SMARCAL1Q9NZC9 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.91□□□□□ -1.78
SMARCAL1Q9NZC9 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.91□□□□□ -1.78
SMARCAL1Q9NZC9 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.91□□□□□ -1.78
SMARCAL1Q9NZC9 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.91□□□□□ -1.78
SMARCAL1Q9NZC9 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.91□□□□□ -1.78
SMARCAL1Q9NZC9 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC3.91□□□□□ -1.78
SMARCAL1Q9NZC9 MTCO1P19-201ENST00000443487 500 ntBASIC3.91□□□□□ -1.78
SMARCAL1Q9NZC9 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.91□□□□□ -1.78
SMARCAL1Q9NZC9 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.91□□□□□ -1.78
SMARCAL1Q9NZC9 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.91□□□□□ -1.78
SMARCAL1Q9NZC9 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.91□□□□□ -1.78
SMARCAL1Q9NZC9 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.91□□□□□ -1.78
SMARCAL1Q9NZC9 RPL30P9-201ENST00000465586 330 ntBASIC3.91□□□□□ -1.78
SMARCAL1Q9NZC9 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.91□□□□□ -1.78
SMARCAL1Q9NZC9 RPL30P11-201ENST00000495304 339 ntBASIC3.91□□□□□ -1.78
SMARCAL1Q9NZC9 FCF1P3-201ENST00000496394 590 ntBASIC3.91□□□□□ -1.78
SMARCAL1Q9NZC9 AC108941.1-201ENST00000502853 530 ntBASIC3.91□□□□□ -1.78
SMARCAL1Q9NZC9 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.91□□□□□ -1.78
SMARCAL1Q9NZC9 RNA5SP309-201ENST00000516670 106 ntBASIC3.91□□□□□ -1.78
SMARCAL1Q9NZC9 MIR2116-201ENST00000517221 80 ntBASIC3.91□□□□□ -1.78
SMARCAL1Q9NZC9 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.91□□□□□ -1.78
SMARCAL1Q9NZC9 AC008802.1-201ENST00000519121 791 ntBASIC3.91□□□□□ -1.78
SMARCAL1Q9NZC9 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SMARCAL1Q9NZC9 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.91□□□□□ -1.78
SMARCAL1Q9NZC9 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.91□□□□□ -1.78
SMARCAL1Q9NZC9 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.91□□□□□ -1.78
SMARCAL1Q9NZC9 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.91□□□□□ -1.78
SMARCAL1Q9NZC9 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.91□□□□□ -1.78
SMARCAL1Q9NZC9 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.91□□□□□ -1.78
SMARCAL1Q9NZC9 AC012414.6-201ENST00000568241 401 ntBASIC3.91□□□□□ -1.78
SMARCAL1Q9NZC9 AC074051.3-201ENST00000570238 358 ntBASIC3.91□□□□□ -1.78
SMARCAL1Q9NZC9 AC120057.2-201ENST00000571520 271 ntBASIC3.91□□□□□ -1.78
SMARCAL1Q9NZC9 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.91□□□□□ -1.78
SMARCAL1Q9NZC9 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.91□□□□□ -1.78
SMARCAL1Q9NZC9 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.91□□□□□ -1.78
SMARCAL1Q9NZC9 AC092354.1-201ENST00000606057 376 ntBASIC3.91□□□□□ -1.78
SMARCAL1Q9NZC9 AC239868.4-201ENST00000608318 671 ntBASIC3.91□□□□□ -1.78
SMARCAL1Q9NZC9 AP000254.1-201ENST00000609934 520 ntBASIC3.91□□□□□ -1.78
SMARCAL1Q9NZC9 AC026585.1-201ENST00000619582 524 ntBASIC3.91□□□□□ -1.78
SMARCAL1Q9NZC9 U7.8-201ENST00000619968 63 ntBASIC3.91□□□□□ -1.78
SMARCAL1Q9NZC9 MIR6500-201ENST00000622700 86 ntBASIC3.91□□□□□ -1.78
SMARCAL1Q9NZC9 AL356596.1-201ENST00000624230 379 ntBASIC3.91□□□□□ -1.78
SMARCAL1Q9NZC9 AC231657.1-201ENST00000624313 397 ntBASIC3.91□□□□□ -1.78
SMARCAL1Q9NZC9 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.91□□□□□ -1.78
SMARCAL1Q9NZC9 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SMARCAL1Q9NZC9 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SMARCAL1Q9NZC9 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.91□□□□□ -1.78
SMARCAL1Q9NZC9 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.9□□□□□ -1.78
SMARCAL1Q9NZC9 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.9□□□□□ -1.78
SMARCAL1Q9NZC9 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
SMARCAL1Q9NZC9 RNU6-433P-201ENST00000363216 104 ntBASIC3.9□□□□□ -1.79
SMARCAL1Q9NZC9 RNA5SP88-201ENST00000365560 109 ntBASIC3.9□□□□□ -1.79
SMARCAL1Q9NZC9 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SMARCAL1Q9NZC9 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
SMARCAL1Q9NZC9 RNU6-1293P-201ENST00000384077 107 ntBASIC3.9□□□□□ -1.79
SMARCAL1Q9NZC9 Y_RNA.559-201ENST00000384686 107 ntBASIC3.9□□□□□ -1.79
SMARCAL1Q9NZC9 MIR506-201ENST00000384998 124 ntBASIC3.9□□□□□ -1.79
SMARCAL1Q9NZC9 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.9□□□□□ -1.79
SMARCAL1Q9NZC9 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
SMARCAL1Q9NZC9 AL031779.1-201ENST00000415663 330 ntBASIC3.9□□□□□ -1.79
SMARCAL1Q9NZC9 HMGB3P20-201ENST00000417997 600 ntBASIC3.9□□□□□ -1.79
SMARCAL1Q9NZC9 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms