Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.4□□□□□ -1.87
HPF1Q9NWY4 NDUFB4P6-201ENST00000436819 366 ntBASIC3.4□□□□□ -1.87
HPF1Q9NWY4 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.4□□□□□ -1.87
HPF1Q9NWY4 RPS4XP10-201ENST00000465034 731 ntBASIC3.4□□□□□ -1.87
HPF1Q9NWY4 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.4□□□□□ -1.87
HPF1Q9NWY4 AC104619.4-201ENST00000510773 249 ntBASIC3.4□□□□□ -1.87
HPF1Q9NWY4 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.4□□□□□ -1.87
HPF1Q9NWY4 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.4□□□□□ -1.87
HPF1Q9NWY4 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
HPF1Q9NWY4 RNU6-1261P-201ENST00000517194 104 ntBASIC3.4□□□□□ -1.87
HPF1Q9NWY4 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.4□□□□□ -1.87
HPF1Q9NWY4 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.4□□□□□ -1.87
HPF1Q9NWY4 OR8I1P-201ENST00000529291 931 ntBASIC3.4□□□□□ -1.87
HPF1Q9NWY4 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.4□□□□□ -1.87
HPF1Q9NWY4 AC125611.1-201ENST00000549563 229 ntBASIC3.4□□□□□ -1.87
HPF1Q9NWY4 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
HPF1Q9NWY4 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.4□□□□□ -1.87
HPF1Q9NWY4 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.4□□□□□ -1.87
HPF1Q9NWY4 AC011260.1-201ENST00000578420 472 ntBASIC3.4□□□□□ -1.87
HPF1Q9NWY4 MIR5708-201ENST00000579723 85 ntBASIC3.4□□□□□ -1.87
HPF1Q9NWY4 AL445435.1-201ENST00000604232 665 ntBASIC3.4□□□□□ -1.87
HPF1Q9NWY4 RNU1-30P-201ENST00000606575 163 ntBASIC3.4□□□□□ -1.87
HPF1Q9NWY4 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.4□□□□□ -1.87
HPF1Q9NWY4 RMST_8.1-201ENST00000610287 165 ntBASIC3.4□□□□□ -1.87
HPF1Q9NWY4 TUG1_1.1-201ENST00000610654 145 ntBASIC3.4□□□□□ -1.87
HPF1Q9NWY4 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
HPF1Q9NWY4 AC079684.1-201ENST00000621405 437 ntBASIC3.4□□□□□ -1.87
HPF1Q9NWY4 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
HPF1Q9NWY4 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
HPF1Q9NWY4 MKKS-204ENST00000639674 192 ntBASIC3.4□□□□□ -1.87
HPF1Q9NWY4 AP000553.6-201ENST00000641242 118 ntBASIC3.4□□□□□ -1.87
HPF1Q9NWY4 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
HPF1Q9NWY4 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
HPF1Q9NWY4 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
HPF1Q9NWY4 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
HPF1Q9NWY4 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
HPF1Q9NWY4 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.4□□□□□ -1.87
HPF1Q9NWY4 AC093908.1-201ENST00000623125 8092 ntBASIC3.39□□□□□ -1.87
HPF1Q9NWY4 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HPF1Q9NWY4 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.39□□□□□ -1.87
HPF1Q9NWY4 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HPF1Q9NWY4 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.39□□□□□ -1.87
HPF1Q9NWY4 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
HPF1Q9NWY4 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
HPF1Q9NWY4 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.39□□□□□ -1.87
HPF1Q9NWY4 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HPF1Q9NWY4 RNA5SP51-201ENST00000364750 119 ntBASIC3.39□□□□□ -1.87
HPF1Q9NWY4 SNORA73.2-201ENST00000364946 201 ntBASIC3.39□□□□□ -1.87
HPF1Q9NWY4 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
HPF1Q9NWY4 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.39□□□□□ -1.87
HPF1Q9NWY4 SNRPEP2-201ENST00000397592 279 ntBASIC3.39□□□□□ -1.87
HPF1Q9NWY4 ATP5A1P2-201ENST00000412323 255 ntBASIC3.39□□□□□ -1.87
HPF1Q9NWY4 RPS29P4-201ENST00000414733 161 ntBASIC3.39□□□□□ -1.87
HPF1Q9NWY4 ZNF736P7Y-201ENST00000425158 820 ntBASIC3.39□□□□□ -1.87
HPF1Q9NWY4 AC093155.1-201ENST00000440164 826 ntBASIC3.39□□□□□ -1.87
HPF1Q9NWY4 MTCYBP11-201ENST00000447254 1109 ntBASIC3.39□□□□□ -1.87
HPF1Q9NWY4 AC010655.1-201ENST00000449336 292 ntBASIC3.39□□□□□ -1.87
HPF1Q9NWY4 AC099563.1-201ENST00000456086 418 ntBASIC3.39□□□□□ -1.87
HPF1Q9NWY4 AC104164.3-201ENST00000467363 1258 ntBASIC3.39□□□□□ -1.87
HPF1Q9NWY4 KCTD9P5-201ENST00000504141 1170 ntBASIC3.39□□□□□ -1.87
HPF1Q9NWY4 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.39□□□□□ -1.87
HPF1Q9NWY4 PHBP14-201ENST00000512887 367 ntBASIC3.39□□□□□ -1.87
HPF1Q9NWY4 AP001207.2-201ENST00000519490 539 ntBASIC3.39□□□□□ -1.87
HPF1Q9NWY4 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.39□□□□□ -1.87
HPF1Q9NWY4 AP001636.2-201ENST00000525517 696 ntBASIC3.39□□□□□ -1.87
HPF1Q9NWY4 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.39□□□□□ -1.87
HPF1Q9NWY4 GTF2IP22-201ENST00000554443 182 ntBASIC3.39□□□□□ -1.87
HPF1Q9NWY4 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.39□□□□□ -1.87
HPF1Q9NWY4 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.39□□□□□ -1.87
HPF1Q9NWY4 AC015688.2-201ENST00000584523 262 ntBASIC3.39□□□□□ -1.87
HPF1Q9NWY4 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.39□□□□□ -1.87
HPF1Q9NWY4 AL365503.1-201ENST00000605247 905 ntBASIC3.39□□□□□ -1.87
HPF1Q9NWY4 AC091905.1-201ENST00000624400 311 ntBASIC3.39□□□□□ -1.87
HPF1Q9NWY4 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
HPF1Q9NWY4 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HPF1Q9NWY4 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HPF1Q9NWY4 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HPF1Q9NWY4 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HPF1Q9NWY4 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
HPF1Q9NWY4 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
HPF1Q9NWY4 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HPF1Q9NWY4 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
HPF1Q9NWY4 SNORD65.1-201ENST00000390889 71 ntBASIC3.38□□□□□ -1.87
HPF1Q9NWY4 RPL7P60-201ENST00000397636 735 ntBASIC3.38□□□□□ -1.87
HPF1Q9NWY4 RNU2-43P-201ENST00000410306 190 ntBASIC3.38□□□□□ -1.87
HPF1Q9NWY4 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.38□□□□□ -1.87
HPF1Q9NWY4 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.38□□□□□ -1.87
HPF1Q9NWY4 BEND7P1-201ENST00000422058 457 ntBASIC3.38□□□□□ -1.87
HPF1Q9NWY4 RPL31P12-201ENST00000422587 358 ntBASIC3.38□□□□□ -1.87
HPF1Q9NWY4 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC3.38□□□□□ -1.87
HPF1Q9NWY4 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.38□□□□□ -1.87
HPF1Q9NWY4 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.38□□□□□ -1.87
HPF1Q9NWY4 MTND2P5-201ENST00000432656 1006 ntBASIC3.38□□□□□ -1.87
HPF1Q9NWY4 AC024082.2-201ENST00000434771 238 ntBASIC3.38□□□□□ -1.87
HPF1Q9NWY4 HSPD1P21-201ENST00000436541 245 ntBASIC3.38□□□□□ -1.87
HPF1Q9NWY4 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
HPF1Q9NWY4 OFD1P3Y-201ENST00000453312 783 ntBASIC3.38□□□□□ -1.87
HPF1Q9NWY4 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC3.38□□□□□ -1.87
HPF1Q9NWY4 PNPLA4P1-201ENST00000458328 305 ntBASIC3.38□□□□□ -1.87
HPF1Q9NWY4 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms