Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 RPL7P5-201ENST00000471472 736 ntBASIC2.8□□□□□ -1.96
CLN6Q9NWW5 AC103987.1-201ENST00000473394 348 ntBASIC2.8□□□□□ -1.96
CLN6Q9NWW5 GAPDHP39-201ENST00000481866 979 ntBASIC2.8□□□□□ -1.96
CLN6Q9NWW5 AC021678.1-201ENST00000505195 936 ntBASIC2.8□□□□□ -1.96
CLN6Q9NWW5 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC2.8□□□□□ -1.96
CLN6Q9NWW5 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC2.8□□□□□ -1.96
CLN6Q9NWW5 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC2.8□□□□□ -1.96
CLN6Q9NWW5 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC2.8□□□□□ -1.96
CLN6Q9NWW5 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC2.8□□□□□ -1.96
CLN6Q9NWW5 CFL2-206ENST00000556161 546 ntTSL 4 BASIC2.8□□□□□ -1.96
CLN6Q9NWW5 MAGOH2P-202ENST00000584384 429 ntBASIC2.8□□□□□ -1.96
CLN6Q9NWW5 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC2.8□□□□□ -1.96
CLN6Q9NWW5 AC083760.1-201ENST00000589621 670 ntBASIC2.8□□□□□ -1.96
CLN6Q9NWW5 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC2.8□□□□□ -1.96
CLN6Q9NWW5 AC055876.5-201ENST00000605667 259 ntBASIC2.8□□□□□ -1.96
CLN6Q9NWW5 AC008962.1-201ENST00000605729 304 ntBASIC2.8□□□□□ -1.96
CLN6Q9NWW5 VN1R74P-201ENST00000613259 503 ntBASIC2.8□□□□□ -1.96
CLN6Q9NWW5 AC073348.1-201ENST00000623002 331 ntBASIC2.8□□□□□ -1.96
CLN6Q9NWW5 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC2.8□□□□□ -1.96
CLN6Q9NWW5 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
CLN6Q9NWW5 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.79□□□□□ -1.96
CLN6Q9NWW5 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.79□□□□□ -1.96
CLN6Q9NWW5 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC2.79□□□□□ -1.96
CLN6Q9NWW5 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CLN6Q9NWW5 AC103988.1-201ENST00000566382 2177 ntBASIC2.79□□□□□ -1.96
CLN6Q9NWW5 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
CLN6Q9NWW5 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
CLN6Q9NWW5 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CLN6Q9NWW5 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.79□□□□□ -1.96
CLN6Q9NWW5 SNORD88.1-201ENST00000408684 91 ntBASIC2.79□□□□□ -1.96
CLN6Q9NWW5 BX323014.1-201ENST00000412876 237 ntBASIC2.79□□□□□ -1.96
CLN6Q9NWW5 AC099677.1-201ENST00000420575 175 ntBASIC2.79□□□□□ -1.96
CLN6Q9NWW5 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC2.79□□□□□ -1.96
CLN6Q9NWW5 RPL31P54-201ENST00000429803 370 ntBASIC2.79□□□□□ -1.96
CLN6Q9NWW5 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.79□□□□□ -1.96
CLN6Q9NWW5 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.79□□□□□ -1.96
CLN6Q9NWW5 AL592437.1-201ENST00000443781 492 ntBASIC2.79□□□□□ -1.96
CLN6Q9NWW5 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CLN6Q9NWW5 RPL23AP31-201ENST00000456160 467 ntBASIC2.79□□□□□ -1.96
CLN6Q9NWW5 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
CLN6Q9NWW5 AC108860.1-201ENST00000484521 383 ntBASIC2.79□□□□□ -1.96
CLN6Q9NWW5 RN7SL20P-201ENST00000488827 297 ntBASIC2.79□□□□□ -1.96
CLN6Q9NWW5 MTCO2P9-201ENST00000503214 694 ntBASIC2.79□□□□□ -1.96
CLN6Q9NWW5 KLHL2P1-201ENST00000508691 521 ntBASIC2.79□□□□□ -1.96
CLN6Q9NWW5 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC2.79□□□□□ -1.96
CLN6Q9NWW5 SNORA31.8-201ENST00000516327 108 ntBASIC2.79□□□□□ -1.96
CLN6Q9NWW5 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC2.79□□□□□ -1.96
CLN6Q9NWW5 AC022690.1-201ENST00000526681 550 ntBASIC2.79□□□□□ -1.96
CLN6Q9NWW5 AC006518.2-201ENST00000542513 940 ntBASIC2.79□□□□□ -1.96
CLN6Q9NWW5 AC084824.1-201ENST00000550917 1005 ntBASIC2.79□□□□□ -1.96
CLN6Q9NWW5 AL391156.1-201ENST00000554965 554 ntBASIC2.79□□□□□ -1.96
CLN6Q9NWW5 OR4H12P-201ENST00000556269 907 ntBASIC2.79□□□□□ -1.96
CLN6Q9NWW5 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC2.79□□□□□ -1.96
CLN6Q9NWW5 AL159169.3-201ENST00000608871 561 ntBASIC2.79□□□□□ -1.96
CLN6Q9NWW5 AL136295.6-201ENST00000610486 658 ntBASIC2.79□□□□□ -1.96
CLN6Q9NWW5 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC2.79□□□□□ -1.96
CLN6Q9NWW5 AC009464.1-201ENST00000615731 469 ntBASIC2.79□□□□□ -1.96
CLN6Q9NWW5 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC2.79□□□□□ -1.96
CLN6Q9NWW5 AL512506.2-201ENST00000624472 458 ntBASIC2.79□□□□□ -1.96
CLN6Q9NWW5 AC090897.3-201ENST00000636973 1157 ntBASIC2.79□□□□□ -1.96
CLN6Q9NWW5 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.79□□□□□ -1.96
CLN6Q9NWW5 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
CLN6Q9NWW5 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.79□□□□□ -1.96
CLN6Q9NWW5 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC2.78□□□□□ -1.96
CLN6Q9NWW5 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC2.78□□□□□ -1.96
CLN6Q9NWW5 AC234772.1-201ENST00000377927 937 ntBASIC2.78□□□□□ -1.96
CLN6Q9NWW5 SNORA57.1-201ENST00000391227 145 ntBASIC2.78□□□□□ -1.96
CLN6Q9NWW5 U3.29-201ENST00000391296 212 ntBASIC2.78□□□□□ -1.96
CLN6Q9NWW5 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.78□□□□□ -1.96
CLN6Q9NWW5 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC2.78□□□□□ -1.96
CLN6Q9NWW5 UBE2D3P2-201ENST00000424409 445 ntBASIC2.78□□□□□ -1.96
CLN6Q9NWW5 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC2.78□□□□□ -1.96
CLN6Q9NWW5 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC2.78□□□□□ -1.96
CLN6Q9NWW5 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.78□□□□□ -1.96
CLN6Q9NWW5 AC093392.2-201ENST00000450682 337 ntBASIC2.78□□□□□ -1.96
CLN6Q9NWW5 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.78□□□□□ -1.96
CLN6Q9NWW5 RPL21P41-201ENST00000459863 264 ntBASIC2.78□□□□□ -1.96
CLN6Q9NWW5 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.78□□□□□ -1.96
CLN6Q9NWW5 AC084024.2-201ENST00000503480 791 ntBASIC2.78□□□□□ -1.96
CLN6Q9NWW5 AC026412.2-201ENST00000512270 1075 ntBASIC2.78□□□□□ -1.96
CLN6Q9NWW5 AC026403.1-201ENST00000518938 295 ntBASIC2.78□□□□□ -1.96
CLN6Q9NWW5 TRMT10BP1-201ENST00000519377 943 ntBASIC2.78□□□□□ -1.96
CLN6Q9NWW5 AC087272.1-201ENST00000523624 533 ntBASIC2.78□□□□□ -1.96
CLN6Q9NWW5 AC239860.2-201ENST00000525886 270 ntBASIC2.78□□□□□ -1.96
CLN6Q9NWW5 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC2.78□□□□□ -1.96
CLN6Q9NWW5 EEF1B2P4-201ENST00000551398 348 ntBASIC2.78□□□□□ -1.96
CLN6Q9NWW5 SULT1C2P1-202ENST00000562418 459 ntBASIC2.78□□□□□ -1.96
CLN6Q9NWW5 AC093510.2-201ENST00000562820 896 ntBASIC2.78□□□□□ -1.96
CLN6Q9NWW5 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CLN6Q9NWW5 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.78□□□□□ -1.96
CLN6Q9NWW5 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC2.78□□□□□ -1.96
CLN6Q9NWW5 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC2.78□□□□□ -1.96
CLN6Q9NWW5 AC092354.2-201ENST00000607786 514 ntBASIC2.78□□□□□ -1.96
CLN6Q9NWW5 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC2.78□□□□□ -1.96
CLN6Q9NWW5 AL355365.1-201ENST00000616480 294 ntBASIC2.78□□□□□ -1.96
CLN6Q9NWW5 AC002076.2-201ENST00000617362 122 ntBASIC2.78□□□□□ -1.96
CLN6Q9NWW5 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
CLN6Q9NWW5 AC068831.8-201ENST00000620171 435 ntBASIC2.78□□□□□ -1.96
CLN6Q9NWW5 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
CLN6Q9NWW5 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms