Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 SNORA38-201ENST00000363946 132 ntBASIC1.46□□□□□ -2.18
CDC42SE1Q9NRR8 SNORA68.1-201ENST00000364537 132 ntBASIC1.46□□□□□ -2.18
CDC42SE1Q9NRR8 RNA5SP37-201ENST00000365420 130 ntBASIC1.46□□□□□ -2.18
CDC42SE1Q9NRR8 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
CDC42SE1Q9NRR8 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
CDC42SE1Q9NRR8 RN7SKP213-201ENST00000410746 298 ntBASIC1.46□□□□□ -2.18
CDC42SE1Q9NRR8 UBE2V1P11-201ENST00000411559 285 ntBASIC1.46□□□□□ -2.18
CDC42SE1Q9NRR8 AL133384.1-201ENST00000412744 351 ntBASIC1.46□□□□□ -2.18
CDC42SE1Q9NRR8 OR8G2P-201ENST00000412796 908 ntBASIC1.46□□□□□ -2.18
CDC42SE1Q9NRR8 TRIM60P5Y-201ENST00000413946 574 ntBASIC1.46□□□□□ -2.18
CDC42SE1Q9NRR8 RPL23AP27-201ENST00000415161 451 ntBASIC1.46□□□□□ -2.18
CDC42SE1Q9NRR8 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC1.46□□□□□ -2.18
CDC42SE1Q9NRR8 RPL27AP8-201ENST00000424277 446 ntBASIC1.46□□□□□ -2.18
CDC42SE1Q9NRR8 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC1.46□□□□□ -2.18
CDC42SE1Q9NRR8 AC016712.1-201ENST00000431088 378 ntBASIC1.46□□□□□ -2.18
CDC42SE1Q9NRR8 AC092573.2-201ENST00000434546 243 ntBASIC1.46□□□□□ -2.18
CDC42SE1Q9NRR8 AC090774.1-201ENST00000435925 246 ntBASIC1.46□□□□□ -2.18
CDC42SE1Q9NRR8 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC1.46□□□□□ -2.18
CDC42SE1Q9NRR8 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC1.46□□□□□ -2.18
CDC42SE1Q9NRR8 MTND5P8-201ENST00000449817 1083 ntBASIC1.46□□□□□ -2.18
CDC42SE1Q9NRR8 Z82190.1-201ENST00000454534 490 ntBASIC1.46□□□□□ -2.18
CDC42SE1Q9NRR8 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC1.46□□□□□ -2.18
CDC42SE1Q9NRR8 MTCO3P2-201ENST00000457365 171 ntBASIC1.46□□□□□ -2.18
CDC42SE1Q9NRR8 AC092798.1-201ENST00000458542 409 ntBASIC1.46□□□□□ -2.18
CDC42SE1Q9NRR8 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC1.46□□□□□ -2.18
CDC42SE1Q9NRR8 AC097493.1-201ENST00000463958 372 ntBASIC1.46□□□□□ -2.18
CDC42SE1Q9NRR8 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC1.46□□□□□ -2.18
CDC42SE1Q9NRR8 RN7SL30P-201ENST00000488416 306 ntBASIC1.46□□□□□ -2.18
CDC42SE1Q9NRR8 RN7SL20P-201ENST00000488827 297 ntBASIC1.46□□□□□ -2.18
CDC42SE1Q9NRR8 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC1.46□□□□□ -2.18
CDC42SE1Q9NRR8 AC108475.1-201ENST00000507880 950 ntBASIC1.46□□□□□ -2.18
CDC42SE1Q9NRR8 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC1.46□□□□□ -2.18
CDC42SE1Q9NRR8 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC1.46□□□□□ -2.18
CDC42SE1Q9NRR8 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC1.46□□□□□ -2.18
CDC42SE1Q9NRR8 RN7SKP122-201ENST00000515923 296 ntBASIC1.46□□□□□ -2.18
CDC42SE1Q9NRR8 IGKV2-18-201ENST00000522607 343 ntBASIC1.46□□□□□ -2.18
CDC42SE1Q9NRR8 AL133271.1-201ENST00000538229 291 ntBASIC1.46□□□□□ -2.18
CDC42SE1Q9NRR8 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC1.46□□□□□ -2.18
CDC42SE1Q9NRR8 AC022404.1-201ENST00000555320 273 ntBASIC1.46□□□□□ -2.18
CDC42SE1Q9NRR8 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC1.46□□□□□ -2.18
CDC42SE1Q9NRR8 AL138976.2-201ENST00000563989 694 ntBASIC1.46□□□□□ -2.18
CDC42SE1Q9NRR8 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
CDC42SE1Q9NRR8 AC233266.2-201ENST00000567067 528 ntBASIC1.46□□□□□ -2.18
CDC42SE1Q9NRR8 AC067852.3-201ENST00000589177 561 ntBASIC1.46□□□□□ -2.18
CDC42SE1Q9NRR8 AC087763.1-201ENST00000603391 286 ntBASIC1.46□□□□□ -2.18
CDC42SE1Q9NRR8 APOOP1-201ENST00000604695 592 ntBASIC1.46□□□□□ -2.18
CDC42SE1Q9NRR8 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC1.46□□□□□ -2.18
CDC42SE1Q9NRR8 AC005332.10-201ENST00000612725 619 ntBASIC1.46□□□□□ -2.18
CDC42SE1Q9NRR8 AC069209.1-201ENST00000619282 651 ntBASIC1.46□□□□□ -2.18
CDC42SE1Q9NRR8 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC1.46□□□□□ -2.18
CDC42SE1Q9NRR8 AC098657.3-201ENST00000620434 263 ntBASIC1.46□□□□□ -2.18
CDC42SE1Q9NRR8 UCA1.1-201ENST00000620952 75 ntBASIC1.46□□□□□ -2.18
CDC42SE1Q9NRR8 MIR6823-201ENST00000622118 61 ntBASIC1.46□□□□□ -2.18
CDC42SE1Q9NRR8 AC112694.2-201ENST00000623697 768 ntBASIC1.46□□□□□ -2.18
CDC42SE1Q9NRR8 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC1.46□□□□□ -2.18
CDC42SE1Q9NRR8 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
CDC42SE1Q9NRR8 AL109809.4-201ENST00000603520 2185 ntBASIC1.46□□□□□ -2.18
CDC42SE1Q9NRR8 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC1.46□□□□□ -2.18
CDC42SE1Q9NRR8 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC1.46□□□□□ -2.18
CDC42SE1Q9NRR8 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.46□□□□□ -2.18
CDC42SE1Q9NRR8 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC1.46□□□□□ -2.18
CDC42SE1Q9NRR8 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.45□□□□□ -2.18
CDC42SE1Q9NRR8 AC008568.2-201ENST00000623862 2313 ntBASIC1.45□□□□□ -2.18
CDC42SE1Q9NRR8 MTND4P1-201ENST00000457501 1466 ntBASIC1.45□□□□□ -2.18
CDC42SE1Q9NRR8 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC1.45□□□□□ -2.18
CDC42SE1Q9NRR8 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
CDC42SE1Q9NRR8 AC097714.1-201ENST00000511272 1647 ntBASIC1.45□□□□□ -2.18
CDC42SE1Q9NRR8 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
CDC42SE1Q9NRR8 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
CDC42SE1Q9NRR8 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
CDC42SE1Q9NRR8 MIRLET7G-201ENST00000362280 84 ntBASIC1.45□□□□□ -2.18
CDC42SE1Q9NRR8 RNA5SP191-201ENST00000362585 102 ntBASIC1.45□□□□□ -2.18
CDC42SE1Q9NRR8 SNORA3A-201ENST00000364113 130 ntBASIC1.45□□□□□ -2.18
CDC42SE1Q9NRR8 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
CDC42SE1Q9NRR8 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC1.45□□□□□ -2.18
CDC42SE1Q9NRR8 SNORA51.6-201ENST00000384151 125 ntBASIC1.45□□□□□ -2.18
CDC42SE1Q9NRR8 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
CDC42SE1Q9NRR8 U3.20-201ENST00000390909 217 ntBASIC1.45□□□□□ -2.18
CDC42SE1Q9NRR8 ATP5F1P3-201ENST00000397213 657 ntBASIC1.45□□□□□ -2.18
CDC42SE1Q9NRR8 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.45□□□□□ -2.18
CDC42SE1Q9NRR8 AL121978.1-201ENST00000402778 359 ntBASIC1.45□□□□□ -2.18
CDC42SE1Q9NRR8 AL024474.1-201ENST00000404655 591 ntBASIC1.45□□□□□ -2.18
CDC42SE1Q9NRR8 RNU6ATAC7P-201ENST00000408111 127 ntBASIC1.45□□□□□ -2.18
CDC42SE1Q9NRR8 RNU6ATAC16P-201ENST00000408591 138 ntBASIC1.45□□□□□ -2.18
CDC42SE1Q9NRR8 RN7SKP33-201ENST00000410942 340 ntBASIC1.45□□□□□ -2.18
CDC42SE1Q9NRR8 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC1.45□□□□□ -2.18
CDC42SE1Q9NRR8 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.45□□□□□ -2.18
CDC42SE1Q9NRR8 AL356379.1-201ENST00000414105 126 ntBASIC1.45□□□□□ -2.18
CDC42SE1Q9NRR8 TATDN1P1-201ENST00000414123 891 ntBASIC1.45□□□□□ -2.18
CDC42SE1Q9NRR8 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC1.45□□□□□ -2.18
CDC42SE1Q9NRR8 Z82198.3-201ENST00000421145 199 ntBASIC1.45□□□□□ -2.18
CDC42SE1Q9NRR8 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC1.45□□□□□ -2.18
CDC42SE1Q9NRR8 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.45□□□□□ -2.18
CDC42SE1Q9NRR8 MTND4LP14-201ENST00000429447 288 ntBASIC1.45□□□□□ -2.18
CDC42SE1Q9NRR8 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC1.45□□□□□ -2.18
CDC42SE1Q9NRR8 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC1.45□□□□□ -2.18
CDC42SE1Q9NRR8 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC1.45□□□□□ -2.18
CDC42SE1Q9NRR8 GPM6BP3-201ENST00000442797 145 ntBASIC1.45□□□□□ -2.18
CDC42SE1Q9NRR8 AL049820.1-201ENST00000442936 423 ntTSL 2 BASIC1.45□□□□□ -2.18
CDC42SE1Q9NRR8 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms