Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 GAPDHP39-201ENST00000481866 979 ntBASIC2.52□□□□□ -2.01
LINC00477Q96M19 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC2.52□□□□□ -2.01
LINC00477Q96M19 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC2.52□□□□□ -2.01
LINC00477Q96M19 DYNLL1P6-201ENST00000503440 264 ntBASIC2.52□□□□□ -2.01
LINC00477Q96M19 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC2.52□□□□□ -2.01
LINC00477Q96M19 AC118282.2-201ENST00000508739 374 ntBASIC2.52□□□□□ -2.01
LINC00477Q96M19 TPT1P8-201ENST00000510120 555 ntBASIC2.52□□□□□ -2.01
LINC00477Q96M19 AC048346.1-201ENST00000510247 144 ntBASIC2.52□□□□□ -2.01
LINC00477Q96M19 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC2.52□□□□□ -2.01
LINC00477Q96M19 APOOP4-201ENST00000513530 597 ntBASIC2.52□□□□□ -2.01
LINC00477Q96M19 NAT2-202ENST00000520116 716 ntTSL 3 BASIC2.52□□□□□ -2.01
LINC00477Q96M19 MTND2P32-201ENST00000521584 1038 ntBASIC2.52□□□□□ -2.01
LINC00477Q96M19 AC104027.1-201ENST00000521887 300 ntBASIC2.52□□□□□ -2.01
LINC00477Q96M19 AC010376.1-201ENST00000522101 334 ntBASIC2.52□□□□□ -2.01
LINC00477Q96M19 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC2.52□□□□□ -2.01
LINC00477Q96M19 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC2.52□□□□□ -2.01
LINC00477Q96M19 GTF2IP22-201ENST00000554443 182 ntBASIC2.52□□□□□ -2.01
LINC00477Q96M19 MTCYBP23-201ENST00000558717 1102 ntBASIC2.52□□□□□ -2.01
LINC00477Q96M19 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC2.52□□□□□ -2.01
LINC00477Q96M19 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC2.52□□□□□ -2.01
LINC00477Q96M19 RN7SL339P-201ENST00000580597 296 ntBASIC2.52□□□□□ -2.01
LINC00477Q96M19 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC2.52□□□□□ -2.01
LINC00477Q96M19 VN1R85P-201ENST00000601587 426 ntBASIC2.52□□□□□ -2.01
LINC00477Q96M19 ACTR3BP1-201ENST00000605584 1247 ntBASIC2.52□□□□□ -2.01
LINC00477Q96M19 AC107294.3-201ENST00000609211 526 ntBASIC2.52□□□□□ -2.01
LINC00477Q96M19 uc_338.1-201ENST00000612113 180 ntBASIC2.52□□□□□ -2.01
LINC00477Q96M19 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC2.52□□□□□ -2.01
LINC00477Q96M19 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC2.52□□□□□ -2.01
LINC00477Q96M19 AL645937.1-201ENST00000641739 1652 ntBASIC2.52□□□□□ -2.01
LINC00477Q96M19 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
LINC00477Q96M19 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
LINC00477Q96M19 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC2.52□□□□□ -2.01
LINC00477Q96M19 CR383658.2-201ENST00000547576 1525 ntBASIC2.52□□□□□ -2.01
LINC00477Q96M19 AL161912.2-201ENST00000565707 3007 ntBASIC2.52□□□□□ -2.01
LINC00477Q96M19 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
LINC00477Q96M19 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
LINC00477Q96M19 AP005901.5-201ENST00000545779 1796 ntBASIC2.51□□□□□ -2.01
LINC00477Q96M19 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
LINC00477Q96M19 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
LINC00477Q96M19 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC2.51□□□□□ -2.01
LINC00477Q96M19 AP000568.1-201ENST00000282964 442 ntBASIC2.51□□□□□ -2.01
LINC00477Q96M19 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
LINC00477Q96M19 RNU6-236P-201ENST00000363886 106 ntBASIC2.51□□□□□ -2.01
LINC00477Q96M19 RNU4-51P-201ENST00000364206 140 ntBASIC2.51□□□□□ -2.01
LINC00477Q96M19 RNA5SP515-201ENST00000364570 118 ntBASIC2.51□□□□□ -2.01
LINC00477Q96M19 CGA-201ENST00000369582 729 ntTSL 5 BASIC2.51□□□□□ -2.01
LINC00477Q96M19 ESD-201ENST00000378697 1079 ntTSL 5 BASIC2.51□□□□□ -2.01
LINC00477Q96M19 RNU6-921P-201ENST00000384361 107 ntBASIC2.51□□□□□ -2.01
LINC00477Q96M19 MTCO2P31-201ENST00000402702 684 ntBASIC2.51□□□□□ -2.01
LINC00477Q96M19 RN7SKP263-201ENST00000411194 309 ntBASIC2.51□□□□□ -2.01
LINC00477Q96M19 AL161449.1-201ENST00000414531 1199 ntBASIC2.51□□□□□ -2.01
LINC00477Q96M19 MRPL50P2-201ENST00000416821 482 ntBASIC2.51□□□□□ -2.01
LINC00477Q96M19 AL356320.2-201ENST00000417263 507 ntBASIC2.51□□□□□ -2.01
LINC00477Q96M19 BOLA3P4-201ENST00000418151 400 ntBASIC2.51□□□□□ -2.01
LINC00477Q96M19 KRR1P1-201ENST00000419430 803 ntBASIC2.51□□□□□ -2.01
LINC00477Q96M19 RPL21P32-201ENST00000419877 477 ntBASIC2.51□□□□□ -2.01
LINC00477Q96M19 BX890604.2-201ENST00000427883 474 ntBASIC2.51□□□□□ -2.01
LINC00477Q96M19 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.51□□□□□ -2.01
LINC00477Q96M19 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC2.51□□□□□ -2.01
LINC00477Q96M19 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC2.51□□□□□ -2.01
LINC00477Q96M19 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.51□□□□□ -2.01
LINC00477Q96M19 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC2.51□□□□□ -2.01
LINC00477Q96M19 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC2.51□□□□□ -2.01
LINC00477Q96M19 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC2.51□□□□□ -2.01
LINC00477Q96M19 ZNF736P8Y-201ENST00000451913 669 ntBASIC2.51□□□□□ -2.01
LINC00477Q96M19 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC2.51□□□□□ -2.01
LINC00477Q96M19 AC091564.1-201ENST00000464563 479 ntBASIC2.51□□□□□ -2.01
LINC00477Q96M19 AC010285.1-201ENST00000470580 392 ntBASIC2.51□□□□□ -2.01
LINC00477Q96M19 AC010301.1-201ENST00000473936 355 ntBASIC2.51□□□□□ -2.01
LINC00477Q96M19 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC2.51□□□□□ -2.01
LINC00477Q96M19 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC2.51□□□□□ -2.01
LINC00477Q96M19 AC111000.2-201ENST00000507775 550 ntBASIC2.51□□□□□ -2.01
LINC00477Q96M19 AC010460.2-201ENST00000509054 677 ntBASIC2.51□□□□□ -2.01
LINC00477Q96M19 AC008837.2-201ENST00000513076 418 ntBASIC2.51□□□□□ -2.01
LINC00477Q96M19 AC092593.2-201ENST00000513866 913 ntBASIC2.51□□□□□ -2.01
LINC00477Q96M19 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC2.51□□□□□ -2.01
LINC00477Q96M19 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC2.51□□□□□ -2.01
LINC00477Q96M19 RNA5SP385-201ENST00000515947 110 ntBASIC2.51□□□□□ -2.01
LINC00477Q96M19 SNORA31.1-201ENST00000515993 133 ntBASIC2.51□□□□□ -2.01
LINC00477Q96M19 SNORA31.5-201ENST00000516190 133 ntBASIC2.51□□□□□ -2.01
LINC00477Q96M19 SNORA31.26-201ENST00000517250 137 ntBASIC2.51□□□□□ -2.01
LINC00477Q96M19 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.51□□□□□ -2.01
LINC00477Q96M19 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC2.51□□□□□ -2.01
LINC00477Q96M19 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.51□□□□□ -2.01
LINC00477Q96M19 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.51□□□□□ -2.01
LINC00477Q96M19 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.51□□□□□ -2.01
LINC00477Q96M19 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.51□□□□□ -2.01
LINC00477Q96M19 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC2.51□□□□□ -2.01
LINC00477Q96M19 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC2.51□□□□□ -2.01
LINC00477Q96M19 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC2.51□□□□□ -2.01
LINC00477Q96M19 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.51□□□□□ -2.01
LINC00477Q96M19 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC2.51□□□□□ -2.01
LINC00477Q96M19 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.51□□□□□ -2.01
LINC00477Q96M19 LARP7P2-201ENST00000575306 125 ntBASIC2.51□□□□□ -2.01
LINC00477Q96M19 MIR4509-3-201ENST00000578671 94 ntBASIC2.51□□□□□ -2.01
LINC00477Q96M19 MIR4509-2-201ENST00000583920 94 ntBASIC2.51□□□□□ -2.01
LINC00477Q96M19 AC017100.2-201ENST00000584628 355 ntBASIC2.51□□□□□ -2.01
LINC00477Q96M19 AC009220.3-201ENST00000604318 586 ntBASIC2.51□□□□□ -2.01
LINC00477Q96M19 AC105148.1-201ENST00000604961 409 ntBASIC2.51□□□□□ -2.01
LINC00477Q96M19 MIR4509-1-201ENST00000618224 94 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms