Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC4.99□□□□□ -1.61
CHMP4CQ96CF2 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.99□□□□□ -1.61
CHMP4CQ96CF2 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.99□□□□□ -1.61
CHMP4CQ96CF2 AL669831.4-202ENST00000590817 238 ntBASIC4.99□□□□□ -1.61
CHMP4CQ96CF2 AC022146.1-201ENST00000595307 847 ntBASIC4.99□□□□□ -1.61
CHMP4CQ96CF2 AC119751.7-201ENST00000600494 245 ntBASIC4.99□□□□□ -1.61
CHMP4CQ96CF2 AL020997.2-201ENST00000602607 184 ntBASIC4.99□□□□□ -1.61
CHMP4CQ96CF2 AP000403.1-201ENST00000603349 851 ntBASIC4.99□□□□□ -1.61
CHMP4CQ96CF2 AL161729.3-201ENST00000603533 673 ntBASIC4.99□□□□□ -1.61
CHMP4CQ96CF2 AC239868.4-201ENST00000608318 671 ntBASIC4.99□□□□□ -1.61
CHMP4CQ96CF2 AC040168.1-201ENST00000623594 991 ntBASIC4.99□□□□□ -1.61
CHMP4CQ96CF2 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.99□□□□□ -1.61
CHMP4CQ96CF2 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.99□□□□□ -1.61
CHMP4CQ96CF2 AC093591.3-201ENST00000634516 308 ntBASIC4.99□□□□□ -1.61
CHMP4CQ96CF2 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.99□□□□□ -1.61
CHMP4CQ96CF2 MTND4P4-201ENST00000439033 1366 ntBASIC4.99□□□□□ -1.61
CHMP4CQ96CF2 AC095050.2-201ENST00000510748 1458 ntBASIC4.99□□□□□ -1.61
CHMP4CQ96CF2 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.99□□□□□ -1.61
CHMP4CQ96CF2 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CHMP4CQ96CF2 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.98□□□□□ -1.61
CHMP4CQ96CF2 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.98□□□□□ -1.61
CHMP4CQ96CF2 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.98□□□□□ -1.61
CHMP4CQ96CF2 Y_RNA.97-201ENST00000363094 102 ntBASIC4.98□□□□□ -1.61
CHMP4CQ96CF2 Y_RNA.553-201ENST00000384670 102 ntBASIC4.98□□□□□ -1.61
CHMP4CQ96CF2 MIR124-3-201ENST00000384866 87 ntBASIC4.98□□□□□ -1.61
CHMP4CQ96CF2 AL356967.1-201ENST00000406305 431 ntBASIC4.98□□□□□ -1.61
CHMP4CQ96CF2 RNA5SP56-201ENST00000410277 118 ntBASIC4.98□□□□□ -1.61
CHMP4CQ96CF2 PGBD4P8-201ENST00000412993 562 ntBASIC4.98□□□□□ -1.61
CHMP4CQ96CF2 RPL17P36-201ENST00000420302 549 ntBASIC4.98□□□□□ -1.61
CHMP4CQ96CF2 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC4.98□□□□□ -1.61
CHMP4CQ96CF2 RWDD4P2-201ENST00000426392 563 ntBASIC4.98□□□□□ -1.61
CHMP4CQ96CF2 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.98□□□□□ -1.61
CHMP4CQ96CF2 RPL23AP46-201ENST00000438548 490 ntBASIC4.98□□□□□ -1.61
CHMP4CQ96CF2 MTCO2P18-201ENST00000457151 658 ntBASIC4.98□□□□□ -1.61
CHMP4CQ96CF2 RPS7P7-201ENST00000463499 571 ntBASIC4.98□□□□□ -1.61
CHMP4CQ96CF2 RPS29P19-201ENST00000479709 171 ntBASIC4.98□□□□□ -1.61
CHMP4CQ96CF2 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.98□□□□□ -1.61
CHMP4CQ96CF2 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.98□□□□□ -1.61
CHMP4CQ96CF2 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC4.98□□□□□ -1.61
CHMP4CQ96CF2 RNU6-27P-201ENST00000516146 107 ntBASIC4.98□□□□□ -1.61
CHMP4CQ96CF2 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CHMP4CQ96CF2 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.98□□□□□ -1.61
CHMP4CQ96CF2 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.98□□□□□ -1.61
CHMP4CQ96CF2 TOMM20P2-201ENST00000540082 421 ntBASIC4.98□□□□□ -1.61
CHMP4CQ96CF2 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC4.98□□□□□ -1.61
CHMP4CQ96CF2 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.98□□□□□ -1.61
CHMP4CQ96CF2 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC4.98□□□□□ -1.61
CHMP4CQ96CF2 AL353997.4-201ENST00000586196 166 ntBASIC4.98□□□□□ -1.61
CHMP4CQ96CF2 AC012065.4-201ENST00000602445 679 ntBASIC4.98□□□□□ -1.61
CHMP4CQ96CF2 AC025594.3-201ENST00000613068 790 ntBASIC4.98□□□□□ -1.61
CHMP4CQ96CF2 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.98□□□□□ -1.61
CHMP4CQ96CF2 AL161637.1-201ENST00000622380 412 ntBASIC4.98□□□□□ -1.61
CHMP4CQ96CF2 AC006065.5-201ENST00000623427 349 ntBASIC4.98□□□□□ -1.61
CHMP4CQ96CF2 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CHMP4CQ96CF2 MAPK10-253ENST00000641010 4072 ntBASIC4.98□□□□□ -1.61
CHMP4CQ96CF2 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CHMP4CQ96CF2 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CHMP4CQ96CF2 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
CHMP4CQ96CF2 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
CHMP4CQ96CF2 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CHMP4CQ96CF2 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CHMP4CQ96CF2 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CHMP4CQ96CF2 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
CHMP4CQ96CF2 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
CHMP4CQ96CF2 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.97□□□□□ -1.61
CHMP4CQ96CF2 SPRR2C-201ENST00000290702 219 ntBASIC4.97□□□□□ -1.61
CHMP4CQ96CF2 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
CHMP4CQ96CF2 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
CHMP4CQ96CF2 RNU6-623P-201ENST00000363143 105 ntBASIC4.97□□□□□ -1.61
CHMP4CQ96CF2 RNA5SP130-201ENST00000364431 114 ntBASIC4.97□□□□□ -1.61
CHMP4CQ96CF2 RNA5SP283-201ENST00000365604 119 ntBASIC4.97□□□□□ -1.61
CHMP4CQ96CF2 RHOT1P2-201ENST00000366423 333 ntBASIC4.97□□□□□ -1.61
CHMP4CQ96CF2 MIR93-201ENST00000385024 80 ntBASIC4.97□□□□□ -1.61
CHMP4CQ96CF2 RNU6-821P-201ENST00000390995 107 ntBASIC4.97□□□□□ -1.61
CHMP4CQ96CF2 RPS26P8-201ENST00000393490 348 ntBASIC4.97□□□□□ -1.61
CHMP4CQ96CF2 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CHMP4CQ96CF2 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.97□□□□□ -1.61
CHMP4CQ96CF2 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CHMP4CQ96CF2 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC4.97□□□□□ -1.61
CHMP4CQ96CF2 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC4.97□□□□□ -1.61
CHMP4CQ96CF2 RSU1P2-202ENST00000437884 485 ntBASIC4.97□□□□□ -1.61
CHMP4CQ96CF2 AC114755.5-201ENST00000447760 831 ntBASIC4.97□□□□□ -1.61
CHMP4CQ96CF2 AP000542.1-201ENST00000448473 371 ntBASIC4.97□□□□□ -1.61
CHMP4CQ96CF2 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.97□□□□□ -1.61
CHMP4CQ96CF2 DNAJC19P1-201ENST00000455312 319 ntBASIC4.97□□□□□ -1.61
CHMP4CQ96CF2 RN7SL271P-201ENST00000487601 295 ntBASIC4.97□□□□□ -1.61
CHMP4CQ96CF2 AC034222.1-201ENST00000494052 532 ntBASIC4.97□□□□□ -1.61
CHMP4CQ96CF2 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.97□□□□□ -1.61
CHMP4CQ96CF2 AC006390.1-201ENST00000508068 283 ntBASIC4.97□□□□□ -1.61
CHMP4CQ96CF2 KCTD9P2-201ENST00000512203 1013 ntBASIC4.97□□□□□ -1.61
CHMP4CQ96CF2 AF131216.2-201ENST00000512316 564 ntBASIC4.97□□□□□ -1.61
CHMP4CQ96CF2 MTND4LP18-201ENST00000526864 291 ntBASIC4.97□□□□□ -1.61
CHMP4CQ96CF2 OR4P1P-201ENST00000530808 1136 ntBASIC4.97□□□□□ -1.61
CHMP4CQ96CF2 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.97□□□□□ -1.61
CHMP4CQ96CF2 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.97□□□□□ -1.61
CHMP4CQ96CF2 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC4.97□□□□□ -1.61
CHMP4CQ96CF2 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC4.97□□□□□ -1.61
CHMP4CQ96CF2 AC012414.6-201ENST00000568241 401 ntBASIC4.97□□□□□ -1.61
CHMP4CQ96CF2 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.97□□□□□ -1.61
CHMP4CQ96CF2 AC022916.3-201ENST00000592961 742 ntBASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms