Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.37□□□□□ -1.87
RFT1Q96AA3 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.37□□□□□ -1.87
RFT1Q96AA3 RPS24P7-201ENST00000416921 246 ntBASIC3.37□□□□□ -1.87
RFT1Q96AA3 MTATP6P27-201ENST00000416987 621 ntBASIC3.37□□□□□ -1.87
RFT1Q96AA3 MTCYBP38-201ENST00000417160 1123 ntBASIC3.37□□□□□ -1.87
RFT1Q96AA3 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.37□□□□□ -1.87
RFT1Q96AA3 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.37□□□□□ -1.87
RFT1Q96AA3 AC245028.1-201ENST00000423259 256 ntBASIC3.37□□□□□ -1.87
RFT1Q96AA3 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.37□□□□□ -1.87
RFT1Q96AA3 RPL21P66-201ENST00000426566 466 ntBASIC3.37□□□□□ -1.87
RFT1Q96AA3 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.37□□□□□ -1.87
RFT1Q96AA3 AL117351.1-201ENST00000438864 766 ntBASIC3.37□□□□□ -1.87
RFT1Q96AA3 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
RFT1Q96AA3 HSPE1P28-201ENST00000443139 211 ntBASIC3.37□□□□□ -1.87
RFT1Q96AA3 Z82190.1-201ENST00000454534 490 ntBASIC3.37□□□□□ -1.87
RFT1Q96AA3 MTCO3P11-201ENST00000455103 774 ntBASIC3.37□□□□□ -1.87
RFT1Q96AA3 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.37□□□□□ -1.87
RFT1Q96AA3 AC110792.1-201ENST00000491826 472 ntBASIC3.37□□□□□ -1.87
RFT1Q96AA3 COX7A2P2-201ENST00000505291 250 ntBASIC3.37□□□□□ -1.87
RFT1Q96AA3 HMGB3P15-201ENST00000507326 574 ntBASIC3.37□□□□□ -1.87
RFT1Q96AA3 SNORA31.9-201ENST00000516429 84 ntBASIC3.37□□□□□ -1.87
RFT1Q96AA3 RNA5SP179-201ENST00000517284 121 ntBASIC3.37□□□□□ -1.87
RFT1Q96AA3 MRPS36P3-201ENST00000519284 130 ntBASIC3.37□□□□□ -1.87
RFT1Q96AA3 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.37□□□□□ -1.87
RFT1Q96AA3 CYCSP29-201ENST00000533731 318 ntBASIC3.37□□□□□ -1.87
RFT1Q96AA3 AC024224.1-201ENST00000538284 609 ntBASIC3.37□□□□□ -1.87
RFT1Q96AA3 UBE2NP1-201ENST00000545592 458 ntBASIC3.37□□□□□ -1.87
RFT1Q96AA3 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.37□□□□□ -1.87
RFT1Q96AA3 MIR4738-201ENST00000579134 87 ntBASIC3.37□□□□□ -1.87
RFT1Q96AA3 AC023575.1-201ENST00000580510 358 ntBASIC3.37□□□□□ -1.87
RFT1Q96AA3 RN7SL600P-201ENST00000581811 299 ntBASIC3.37□□□□□ -1.87
RFT1Q96AA3 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.37□□□□□ -1.87
RFT1Q96AA3 KPNA2P3-201ENST00000584190 848 ntBASIC3.37□□□□□ -1.87
RFT1Q96AA3 MIR4443-201ENST00000585052 53 ntBASIC3.37□□□□□ -1.87
RFT1Q96AA3 AC061975.8-201ENST00000587058 721 ntBASIC3.37□□□□□ -1.87
RFT1Q96AA3 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RFT1Q96AA3 VN1R82P-201ENST00000601481 356 ntBASIC3.37□□□□□ -1.87
RFT1Q96AA3 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.37□□□□□ -1.87
RFT1Q96AA3 AC104785.1-201ENST00000603220 588 ntBASIC3.37□□□□□ -1.87
RFT1Q96AA3 AC091167.4-201ENST00000605079 184 ntBASIC3.37□□□□□ -1.87
RFT1Q96AA3 AC112220.3-201ENST00000605502 502 ntBASIC3.37□□□□□ -1.87
RFT1Q96AA3 AC006270.3-201ENST00000605967 1036 ntBASIC3.37□□□□□ -1.87
RFT1Q96AA3 SNORA51-201ENST00000606420 132 ntBASIC3.37□□□□□ -1.87
RFT1Q96AA3 AL357080.1-201ENST00000617394 239 ntBASIC3.37□□□□□ -1.87
RFT1Q96AA3 AL596245.1-201ENST00000618994 362 ntBASIC3.37□□□□□ -1.87
RFT1Q96AA3 AL445264.1-201ENST00000621719 171 ntBASIC3.37□□□□□ -1.87
RFT1Q96AA3 AL356585.4-201ENST00000623078 1229 ntBASIC3.37□□□□□ -1.87
RFT1Q96AA3 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.37□□□□□ -1.87
RFT1Q96AA3 AC231657.1-201ENST00000624313 397 ntBASIC3.37□□□□□ -1.87
RFT1Q96AA3 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
RFT1Q96AA3 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.37□□□□□ -1.87
RFT1Q96AA3 NF1-214ENST00000490416 1329 ntTSL 3 BASIC3.37□□□□□ -1.87
RFT1Q96AA3 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.37□□□□□ -1.87
RFT1Q96AA3 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.37□□□□□ -1.87
RFT1Q96AA3 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
RFT1Q96AA3 AC073429.2-201ENST00000569694 1444 ntBASIC3.36□□□□□ -1.87
RFT1Q96AA3 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.36□□□□□ -1.87
RFT1Q96AA3 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.36□□□□□ -1.87
RFT1Q96AA3 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.36□□□□□ -1.87
RFT1Q96AA3 RNA5SP295-201ENST00000362655 121 ntBASIC3.36□□□□□ -1.87
RFT1Q96AA3 RNA5SP130-201ENST00000364431 114 ntBASIC3.36□□□□□ -1.87
RFT1Q96AA3 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.36□□□□□ -1.87
RFT1Q96AA3 OR6C69P-201ENST00000394268 893 ntBASIC3.36□□□□□ -1.87
RFT1Q96AA3 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.36□□□□□ -1.87
RFT1Q96AA3 RNU2-71P-201ENST00000411395 189 ntBASIC3.36□□□□□ -1.87
RFT1Q96AA3 CRYBB2P1-203ENST00000415709 538 ntBASIC3.36□□□□□ -1.87
RFT1Q96AA3 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC3.36□□□□□ -1.87
RFT1Q96AA3 OR1AA1P-201ENST00000419597 916 ntBASIC3.36□□□□□ -1.87
RFT1Q96AA3 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC3.36□□□□□ -1.87
RFT1Q96AA3 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.36□□□□□ -1.87
RFT1Q96AA3 MTCO2P5-201ENST00000422621 426 ntBASIC3.36□□□□□ -1.87
RFT1Q96AA3 AL691449.1-201ENST00000426570 421 ntBASIC3.36□□□□□ -1.87
RFT1Q96AA3 AC016712.1-201ENST00000431088 378 ntBASIC3.36□□□□□ -1.87
RFT1Q96AA3 MUPP-201ENST00000438111 566 ntBASIC3.36□□□□□ -1.87
RFT1Q96AA3 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.36□□□□□ -1.87
RFT1Q96AA3 TXNP1-201ENST00000441872 371 ntBASIC3.36□□□□□ -1.87
RFT1Q96AA3 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.36□□□□□ -1.87
RFT1Q96AA3 NUTF2P3-201ENST00000448540 384 ntBASIC3.36□□□□□ -1.87
RFT1Q96AA3 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.36□□□□□ -1.87
RFT1Q96AA3 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.36□□□□□ -1.87
RFT1Q96AA3 HMGN2P16-201ENST00000456802 261 ntBASIC3.36□□□□□ -1.87
RFT1Q96AA3 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.36□□□□□ -1.87
RFT1Q96AA3 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.36□□□□□ -1.87
RFT1Q96AA3 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.36□□□□□ -1.87
RFT1Q96AA3 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RFT1Q96AA3 AC034244.1-201ENST00000507687 207 ntBASIC3.36□□□□□ -1.87
RFT1Q96AA3 PHBP14-201ENST00000512887 367 ntBASIC3.36□□□□□ -1.87
RFT1Q96AA3 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.36□□□□□ -1.87
RFT1Q96AA3 AC105185.1-201ENST00000518705 535 ntBASIC3.36□□□□□ -1.87
RFT1Q96AA3 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC3.36□□□□□ -1.87
RFT1Q96AA3 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.36□□□□□ -1.87
RFT1Q96AA3 CR383656.6-201ENST00000550518 394 ntBASIC3.36□□□□□ -1.87
RFT1Q96AA3 DUXAP1-201ENST00000556632 463 ntBASIC3.36□□□□□ -1.87
RFT1Q96AA3 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.36□□□□□ -1.87
RFT1Q96AA3 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.36□□□□□ -1.87
RFT1Q96AA3 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.36□□□□□ -1.87
RFT1Q96AA3 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.36□□□□□ -1.87
RFT1Q96AA3 AC013444.2-201ENST00000603317 787 ntBASIC3.36□□□□□ -1.87
RFT1Q96AA3 AL158042.1-201ENST00000605338 460 ntBASIC3.36□□□□□ -1.87
RFT1Q96AA3 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms