Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 SNORA31.15-201ENST00000516771 132 ntBASIC3□□□□□ -1.93
CCDC112Q8NEF3 AC009812.2-201ENST00000517657 457 ntBASIC3□□□□□ -1.93
CCDC112Q8NEF3 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3□□□□□ -1.93
CCDC112Q8NEF3 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3□□□□□ -1.93
CCDC112Q8NEF3 AL121603.1-201ENST00000553815 142 ntBASIC3□□□□□ -1.93
CCDC112Q8NEF3 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3□□□□□ -1.93
CCDC112Q8NEF3 AL049874.4-201ENST00000557593 255 ntBASIC3□□□□□ -1.93
CCDC112Q8NEF3 AL590282.1-201ENST00000610379 1136 ntBASIC3□□□□□ -1.93
CCDC112Q8NEF3 MIR6852-201ENST00000621699 66 ntBASIC3□□□□□ -1.93
CCDC112Q8NEF3 AC002546.1-201ENST00000588041 2504 ntBASIC3□□□□□ -1.93
CCDC112Q8NEF3 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3□□□□□ -1.93
CCDC112Q8NEF3 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3□□□□□ -1.93
CCDC112Q8NEF3 AC080100.1-201ENST00000624239 5356 ntBASIC3□□□□□ -1.93
CCDC112Q8NEF3 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.99□□□□□ -1.93
CCDC112Q8NEF3 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CCDC112Q8NEF3 SNORA5B-201ENST00000363786 132 ntBASIC2.99□□□□□ -1.93
CCDC112Q8NEF3 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.99□□□□□ -1.93
CCDC112Q8NEF3 RNU6-891P-201ENST00000384280 111 ntBASIC2.99□□□□□ -1.93
CCDC112Q8NEF3 MTATP6P31-201ENST00000406985 692 ntBASIC2.99□□□□□ -1.93
CCDC112Q8NEF3 YPEL5P1-201ENST00000419731 367 ntBASIC2.99□□□□□ -1.93
CCDC112Q8NEF3 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC2.99□□□□□ -1.93
CCDC112Q8NEF3 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC2.99□□□□□ -1.93
CCDC112Q8NEF3 AC112653.1-201ENST00000443851 386 ntBASIC2.99□□□□□ -1.93
CCDC112Q8NEF3 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.99□□□□□ -1.93
CCDC112Q8NEF3 AC096576.1-201ENST00000489014 359 ntBASIC2.99□□□□□ -1.93
CCDC112Q8NEF3 RPS27P27-201ENST00000498779 255 ntBASIC2.99□□□□□ -1.93
CCDC112Q8NEF3 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.99□□□□□ -1.93
CCDC112Q8NEF3 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.99□□□□□ -1.93
CCDC112Q8NEF3 AC104115.2-201ENST00000523026 687 ntBASIC2.99□□□□□ -1.93
CCDC112Q8NEF3 AC024224.1-201ENST00000538284 609 ntBASIC2.99□□□□□ -1.93
CCDC112Q8NEF3 CR383656.14-201ENST00000551951 406 ntBASIC2.99□□□□□ -1.93
CCDC112Q8NEF3 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC2.99□□□□□ -1.93
CCDC112Q8NEF3 BDH2P1-201ENST00000602288 736 ntBASIC2.99□□□□□ -1.93
CCDC112Q8NEF3 AP004372.1-201ENST00000604842 844 ntBASIC2.99□□□□□ -1.93
CCDC112Q8NEF3 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC2.99□□□□□ -1.93
CCDC112Q8NEF3 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.99□□□□□ -1.93
CCDC112Q8NEF3 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CCDC112Q8NEF3 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.99□□□□□ -1.93
CCDC112Q8NEF3 AP002907.1-201ENST00000606361 1430 ntBASIC2.99□□□□□ -1.93
CCDC112Q8NEF3 MAPK10-266ENST00000641066 6555 ntBASIC2.99□□□□□ -1.93
CCDC112Q8NEF3 ZNF37BP-203ENST00000452306 1352 ntBASIC2.99□□□□□ -1.93
CCDC112Q8NEF3 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.99□□□□□ -1.93
CCDC112Q8NEF3 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.99□□□□□ -1.93
CCDC112Q8NEF3 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.98□□□□□ -1.93
CCDC112Q8NEF3 ZNF271P-202ENST00000465539 1970 ntBASIC2.98□□□□□ -1.93
CCDC112Q8NEF3 SAGE4P-201ENST00000442271 3381 ntBASIC2.98□□□□□ -1.93
CCDC112Q8NEF3 AC092435.3-201ENST00000565538 3654 ntBASIC2.98□□□□□ -1.93
CCDC112Q8NEF3 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
CCDC112Q8NEF3 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CCDC112Q8NEF3 SNORA80A-201ENST00000363922 136 ntBASIC2.98□□□□□ -1.93
CCDC112Q8NEF3 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.98□□□□□ -1.93
CCDC112Q8NEF3 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.98□□□□□ -1.93
CCDC112Q8NEF3 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.98□□□□□ -1.93
CCDC112Q8NEF3 TRAPPC13P1-201ENST00000435991 1062 ntBASIC2.98□□□□□ -1.93
CCDC112Q8NEF3 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.98□□□□□ -1.93
CCDC112Q8NEF3 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.98□□□□□ -1.93
CCDC112Q8NEF3 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CCDC112Q8NEF3 AL627224.1-201ENST00000448334 444 ntBASIC2.98□□□□□ -1.93
CCDC112Q8NEF3 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.98□□□□□ -1.93
CCDC112Q8NEF3 UBE2DNL-203ENST00000474922 222 ntBASIC2.98□□□□□ -1.93
CCDC112Q8NEF3 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC2.98□□□□□ -1.93
CCDC112Q8NEF3 AC091826.1-201ENST00000514065 313 ntBASIC2.98□□□□□ -1.93
CCDC112Q8NEF3 SNORD59.2-201ENST00000516873 68 ntBASIC2.98□□□□□ -1.93
CCDC112Q8NEF3 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.98□□□□□ -1.93
CCDC112Q8NEF3 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC2.98□□□□□ -1.93
CCDC112Q8NEF3 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC2.98□□□□□ -1.93
CCDC112Q8NEF3 AC074029.1-201ENST00000552531 1044 ntBASIC2.98□□□□□ -1.93
CCDC112Q8NEF3 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.98□□□□□ -1.93
CCDC112Q8NEF3 SNORD84-203ENST00000584275 78 ntBASIC2.98□□□□□ -1.93
CCDC112Q8NEF3 MTCO3P22-201ENST00000603219 784 ntBASIC2.98□□□□□ -1.93
CCDC112Q8NEF3 BNIP3P7-201ENST00000605641 516 ntBASIC2.98□□□□□ -1.93
CCDC112Q8NEF3 AC135803.1-201ENST00000608748 565 ntBASIC2.98□□□□□ -1.93
CCDC112Q8NEF3 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.98□□□□□ -1.93
CCDC112Q8NEF3 AC068831.7-201ENST00000616954 363 ntBASIC2.98□□□□□ -1.93
CCDC112Q8NEF3 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.98□□□□□ -1.93
CCDC112Q8NEF3 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC2.98□□□□□ -1.93
CCDC112Q8NEF3 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CCDC112Q8NEF3 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC2.98□□□□□ -1.93
CCDC112Q8NEF3 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CCDC112Q8NEF3 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CCDC112Q8NEF3 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.97□□□□□ -1.93
CCDC112Q8NEF3 METTL21EP-201ENST00000298105 713 ntBASIC2.97□□□□□ -1.93
CCDC112Q8NEF3 RNU1-100P-201ENST00000365255 165 ntBASIC2.97□□□□□ -1.93
CCDC112Q8NEF3 ARF4P3-201ENST00000397387 509 ntBASIC2.97□□□□□ -1.93
CCDC112Q8NEF3 AL591034.1-201ENST00000407447 340 ntBASIC2.97□□□□□ -1.93
CCDC112Q8NEF3 MTCYBP24-201ENST00000420387 1106 ntBASIC2.97□□□□□ -1.93
CCDC112Q8NEF3 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC2.97□□□□□ -1.93
CCDC112Q8NEF3 AC025750.2-201ENST00000442609 450 ntBASIC2.97□□□□□ -1.93
CCDC112Q8NEF3 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC2.97□□□□□ -1.93
CCDC112Q8NEF3 SRIP1-201ENST00000489235 288 ntBASIC2.97□□□□□ -1.93
CCDC112Q8NEF3 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.97□□□□□ -1.93
CCDC112Q8NEF3 RNU1-61P-201ENST00000516107 151 ntBASIC2.97□□□□□ -1.93
CCDC112Q8NEF3 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC2.97□□□□□ -1.93
CCDC112Q8NEF3 AC084033.1-201ENST00000550830 633 ntBASIC2.97□□□□□ -1.93
CCDC112Q8NEF3 OR2AS2P-201ENST00000606902 342 ntBASIC2.97□□□□□ -1.93
CCDC112Q8NEF3 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.97□□□□□ -1.93
CCDC112Q8NEF3 AC104237.2-201ENST00000612456 443 ntBASIC2.97□□□□□ -1.93
CCDC112Q8NEF3 ATP5A1P2-202ENST00000616464 443 ntBASIC2.97□□□□□ -1.93
CCDC112Q8NEF3 AP004607.9-201ENST00000618202 316 ntBASIC2.97□□□□□ -1.93
CCDC112Q8NEF3 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 128.9 ms