Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 AL391497.1-201ENST00000608671 547 ntBASIC4.38□□□□□ -1.71
USP38Q8NB14 AL360219.1-201ENST00000610230 366 ntBASIC4.38□□□□□ -1.71
USP38Q8NB14 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC4.38□□□□□ -1.71
USP38Q8NB14 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
USP38Q8NB14 U73479.1-201ENST00000618062 168 ntBASIC4.38□□□□□ -1.71
USP38Q8NB14 AL359715.5-201ENST00000623431 443 ntBASIC4.38□□□□□ -1.71
USP38Q8NB14 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
USP38Q8NB14 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
USP38Q8NB14 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
USP38Q8NB14 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
USP38Q8NB14 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
USP38Q8NB14 AC233263.6-201ENST00000631132 1963 ntBASIC4.38□□□□□ -1.71
USP38Q8NB14 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
USP38Q8NB14 PRO1804-201ENST00000623780 2050 ntBASIC4.37□□□□□ -1.71
USP38Q8NB14 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC4.37□□□□□ -1.71
USP38Q8NB14 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
USP38Q8NB14 PABPC1P7-201ENST00000413177 1513 ntBASIC4.37□□□□□ -1.71
USP38Q8NB14 MTCO1P23-201ENST00000415223 1526 ntBASIC4.37□□□□□ -1.71
USP38Q8NB14 AL359893.1-201ENST00000447628 1580 ntBASIC4.37□□□□□ -1.71
USP38Q8NB14 RNA5SP97-201ENST00000365006 84 ntBASIC4.37□□□□□ -1.71
USP38Q8NB14 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC4.37□□□□□ -1.71
USP38Q8NB14 SNORD3H-201ENST00000384486 214 ntBASIC4.37□□□□□ -1.71
USP38Q8NB14 RPL31P1-201ENST00000398116 372 ntBASIC4.37□□□□□ -1.71
USP38Q8NB14 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
USP38Q8NB14 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.37□□□□□ -1.71
USP38Q8NB14 MTCYBP38-201ENST00000417160 1123 ntBASIC4.37□□□□□ -1.71
USP38Q8NB14 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.37□□□□□ -1.71
USP38Q8NB14 UBE2D3P1-201ENST00000436669 444 ntBASIC4.37□□□□□ -1.71
USP38Q8NB14 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.37□□□□□ -1.71
USP38Q8NB14 AL590399.6-201ENST00000446396 307 ntBASIC4.37□□□□□ -1.71
USP38Q8NB14 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.37□□□□□ -1.71
USP38Q8NB14 MTCO3P16-201ENST00000454456 754 ntBASIC4.37□□□□□ -1.71
USP38Q8NB14 MTCO3P11-201ENST00000455103 774 ntBASIC4.37□□□□□ -1.71
USP38Q8NB14 RPS27AP1-201ENST00000475545 471 ntBASIC4.37□□□□□ -1.71
USP38Q8NB14 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.37□□□□□ -1.71
USP38Q8NB14 RNA5SP179-201ENST00000517284 121 ntBASIC4.37□□□□□ -1.71
USP38Q8NB14 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC4.37□□□□□ -1.71
USP38Q8NB14 AC239860.2-201ENST00000525886 270 ntBASIC4.37□□□□□ -1.71
USP38Q8NB14 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.37□□□□□ -1.71
USP38Q8NB14 YPEL5P3-201ENST00000547227 352 ntBASIC4.37□□□□□ -1.71
USP38Q8NB14 AC012435.1-202ENST00000568772 240 ntBASIC4.37□□□□□ -1.71
USP38Q8NB14 ISCA1P3-201ENST00000577104 373 ntBASIC4.37□□□□□ -1.71
USP38Q8NB14 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.37□□□□□ -1.71
USP38Q8NB14 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC4.37□□□□□ -1.71
USP38Q8NB14 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.37□□□□□ -1.71
USP38Q8NB14 HMGB1P50-201ENST00000605814 607 ntBASIC4.37□□□□□ -1.71
USP38Q8NB14 AC107294.1-201ENST00000609524 467 ntBASIC4.37□□□□□ -1.71
USP38Q8NB14 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.37□□□□□ -1.71
USP38Q8NB14 AL139089.1-201ENST00000620372 975 ntBASIC4.37□□□□□ -1.71
USP38Q8NB14 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.37□□□□□ -1.71
USP38Q8NB14 CU459211.1-201ENST00000635667 749 ntBASIC4.37□□□□□ -1.71
USP38Q8NB14 AL773545.4-201ENST00000637262 310 ntBASIC4.37□□□□□ -1.71
USP38Q8NB14 AC007671.2-201ENST00000637344 619 ntBASIC4.37□□□□□ -1.71
USP38Q8NB14 AL513478.4-201ENST00000641636 310 ntBASIC4.37□□□□□ -1.71
USP38Q8NB14 AC087359.1-201ENST00000508335 1740 ntBASIC4.37□□□□□ -1.71
USP38Q8NB14 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.37□□□□□ -1.71
USP38Q8NB14 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
USP38Q8NB14 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
USP38Q8NB14 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
USP38Q8NB14 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.37□□□□□ -1.71
USP38Q8NB14 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
USP38Q8NB14 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
USP38Q8NB14 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.36□□□□□ -1.71
USP38Q8NB14 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
USP38Q8NB14 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
USP38Q8NB14 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
USP38Q8NB14 RNU6-263P-201ENST00000363811 107 ntBASIC4.36□□□□□ -1.71
USP38Q8NB14 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
USP38Q8NB14 DHFRP6-201ENST00000401776 268 ntBASIC4.36□□□□□ -1.71
USP38Q8NB14 MIR1289-1-201ENST00000408836 144 ntBASIC4.36□□□□□ -1.71
USP38Q8NB14 RNU4-78P-201ENST00000410940 126 ntBASIC4.36□□□□□ -1.71
USP38Q8NB14 PIGPP2-201ENST00000411569 458 ntBASIC4.36□□□□□ -1.71
USP38Q8NB14 PGBD4P8-201ENST00000412993 562 ntBASIC4.36□□□□□ -1.71
USP38Q8NB14 USP9YP26-201ENST00000421008 661 ntBASIC4.36□□□□□ -1.71
USP38Q8NB14 AL953862.1-201ENST00000423016 168 ntBASIC4.36□□□□□ -1.71
USP38Q8NB14 GLRXP1-201ENST00000423261 334 ntBASIC4.36□□□□□ -1.71
USP38Q8NB14 MTND4P20-201ENST00000424125 869 ntBASIC4.36□□□□□ -1.71
USP38Q8NB14 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC4.36□□□□□ -1.71
USP38Q8NB14 RPL23AP74-201ENST00000437246 471 ntBASIC4.36□□□□□ -1.71
USP38Q8NB14 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC4.36□□□□□ -1.71
USP38Q8NB14 AL356535.1-201ENST00000440335 398 ntBASIC4.36□□□□□ -1.71
USP38Q8NB14 MTCYBP3-201ENST00000445588 1137 ntBASIC4.36□□□□□ -1.71
USP38Q8NB14 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.36□□□□□ -1.71
USP38Q8NB14 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.36□□□□□ -1.71
USP38Q8NB14 MEMO1P3-201ENST00000459811 302 ntBASIC4.36□□□□□ -1.71
USP38Q8NB14 RPL21P11-201ENST00000461458 483 ntBASIC4.36□□□□□ -1.71
USP38Q8NB14 BET1P1-201ENST00000482276 359 ntBASIC4.36□□□□□ -1.71
USP38Q8NB14 AHI1-208ENST00000488690 712 ntTSL 5 BASIC4.36□□□□□ -1.71
USP38Q8NB14 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.36□□□□□ -1.71
USP38Q8NB14 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.36□□□□□ -1.71
USP38Q8NB14 AC118465.1-201ENST00000513820 1271 ntBASIC4.36□□□□□ -1.71
USP38Q8NB14 NDUFA5P2-201ENST00000519723 344 ntBASIC4.36□□□□□ -1.71
USP38Q8NB14 AC007991.1-201ENST00000522680 631 ntBASIC4.36□□□□□ -1.71
USP38Q8NB14 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
USP38Q8NB14 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
USP38Q8NB14 AP005205.1-201ENST00000563503 508 ntBASIC4.36□□□□□ -1.71
USP38Q8NB14 AC002400.1-201ENST00000569310 726 ntBASIC4.36□□□□□ -1.71
USP38Q8NB14 AC091167.4-201ENST00000605079 184 ntBASIC4.36□□□□□ -1.71
USP38Q8NB14 AC128687.2-201ENST00000609657 566 ntBASIC4.36□□□□□ -1.71
USP38Q8NB14 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms