Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 AC011755.1-201ENST00000623763 2049 ntBASIC4.94□□□□□ -1.62
ATG4DQ86TL0 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC4.94□□□□□ -1.62
ATG4DQ86TL0 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
ATG4DQ86TL0 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
ATG4DQ86TL0 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.94□□□□□ -1.62
ATG4DQ86TL0 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
ATG4DQ86TL0 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
ATG4DQ86TL0 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
ATG4DQ86TL0 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
ATG4DQ86TL0 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
ATG4DQ86TL0 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
ATG4DQ86TL0 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
ATG4DQ86TL0 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC4.93□□□□□ -1.62
ATG4DQ86TL0 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
ATG4DQ86TL0 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
ATG4DQ86TL0 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
ATG4DQ86TL0 Y_RNA.14-201ENST00000362415 103 ntBASIC4.93□□□□□ -1.62
ATG4DQ86TL0 Y_RNA.106-201ENST00000363189 100 ntBASIC4.93□□□□□ -1.62
ATG4DQ86TL0 RN7SKP162-201ENST00000363605 345 ntBASIC4.93□□□□□ -1.62
ATG4DQ86TL0 RNA5SP234-201ENST00000363916 119 ntBASIC4.93□□□□□ -1.62
ATG4DQ86TL0 Y_RNA.291-201ENST00000364886 113 ntBASIC4.93□□□□□ -1.62
ATG4DQ86TL0 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
ATG4DQ86TL0 Y_RNA.424-201ENST00000384063 103 ntBASIC4.93□□□□□ -1.62
ATG4DQ86TL0 RNU6-187P-201ENST00000384139 106 ntBASIC4.93□□□□□ -1.62
ATG4DQ86TL0 SNORA16A-201ENST00000384342 137 ntBASIC4.93□□□□□ -1.62
ATG4DQ86TL0 EIF4E2P1-201ENST00000393781 255 ntBASIC4.93□□□□□ -1.62
ATG4DQ86TL0 MORN2-203ENST00000409131 544 ntTSL 5 BASIC4.93□□□□□ -1.62
ATG4DQ86TL0 Y_RNA.594-201ENST00000410373 140 ntBASIC4.93□□□□□ -1.62
ATG4DQ86TL0 E2F6P2-201ENST00000420708 748 ntBASIC4.93□□□□□ -1.62
ATG4DQ86TL0 MED13P1-201ENST00000428342 171 ntBASIC4.93□□□□□ -1.62
ATG4DQ86TL0 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC4.93□□□□□ -1.62
ATG4DQ86TL0 AC236972.1-201ENST00000433225 199 ntBASIC4.93□□□□□ -1.62
ATG4DQ86TL0 RPS17P8-201ENST00000434525 335 ntBASIC4.93□□□□□ -1.62
ATG4DQ86TL0 RPS26P40-201ENST00000435209 294 ntBASIC4.93□□□□□ -1.62
ATG4DQ86TL0 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.93□□□□□ -1.62
ATG4DQ86TL0 YWHAZP8-201ENST00000436935 731 ntBASIC4.93□□□□□ -1.62
ATG4DQ86TL0 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC4.93□□□□□ -1.62
ATG4DQ86TL0 RPL21P133-201ENST00000443666 476 ntBASIC4.93□□□□□ -1.62
ATG4DQ86TL0 FTH1P25-201ENST00000447665 469 ntBASIC4.93□□□□□ -1.62
ATG4DQ86TL0 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
ATG4DQ86TL0 MTCO3P2-201ENST00000457365 171 ntBASIC4.93□□□□□ -1.62
ATG4DQ86TL0 AP000797.2-201ENST00000475768 606 ntBASIC4.93□□□□□ -1.62
ATG4DQ86TL0 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.93□□□□□ -1.62
ATG4DQ86TL0 RN7SL547P-201ENST00000490793 290 ntBASIC4.93□□□□□ -1.62
ATG4DQ86TL0 AC020893.1-201ENST00000502452 580 ntBASIC4.93□□□□□ -1.62
ATG4DQ86TL0 HMGB1P35-201ENST00000503360 598 ntBASIC4.93□□□□□ -1.62
ATG4DQ86TL0 AC010350.1-201ENST00000504908 231 ntBASIC4.93□□□□□ -1.62
ATG4DQ86TL0 AC022493.2-201ENST00000506122 481 ntBASIC4.93□□□□□ -1.62
ATG4DQ86TL0 HIGD1AP13-201ENST00000509878 289 ntBASIC4.93□□□□□ -1.62
ATG4DQ86TL0 MTCO3P44-201ENST00000510977 541 ntBASIC4.93□□□□□ -1.62
ATG4DQ86TL0 RNU4-77P-201ENST00000516692 156 ntBASIC4.93□□□□□ -1.62
ATG4DQ86TL0 RNU6-182P-201ENST00000516970 105 ntBASIC4.93□□□□□ -1.62
ATG4DQ86TL0 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
ATG4DQ86TL0 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.93□□□□□ -1.62
ATG4DQ86TL0 OR4P1P-201ENST00000530808 1136 ntBASIC4.93□□□□□ -1.62
ATG4DQ86TL0 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.93□□□□□ -1.62
ATG4DQ86TL0 AC135001.1-201ENST00000544546 283 ntBASIC4.93□□□□□ -1.62
ATG4DQ86TL0 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
ATG4DQ86TL0 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC4.93□□□□□ -1.62
ATG4DQ86TL0 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC4.93□□□□□ -1.62
ATG4DQ86TL0 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC4.93□□□□□ -1.62
ATG4DQ86TL0 AC060771.1-201ENST00000582031 164 ntBASIC4.93□□□□□ -1.62
ATG4DQ86TL0 AC010201.1-201ENST00000605051 540 ntBASIC4.93□□□□□ -1.62
ATG4DQ86TL0 HSPE1P14-201ENST00000605812 302 ntBASIC4.93□□□□□ -1.62
ATG4DQ86TL0 AC133644.2-201ENST00000608142 540 ntBASIC4.93□□□□□ -1.62
ATG4DQ86TL0 AC244107.2-201ENST00000611773 76 ntBASIC4.93□□□□□ -1.62
ATG4DQ86TL0 AC011155.2-201ENST00000623202 216 ntBASIC4.93□□□□□ -1.62
ATG4DQ86TL0 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
ATG4DQ86TL0 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
ATG4DQ86TL0 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
ATG4DQ86TL0 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
ATG4DQ86TL0 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
ATG4DQ86TL0 AC007342.5-201ENST00000571340 2142 ntBASIC4.93□□□□□ -1.62
ATG4DQ86TL0 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC4.92□□□□□ -1.62
ATG4DQ86TL0 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC4.92□□□□□ -1.62
ATG4DQ86TL0 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
ATG4DQ86TL0 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.92□□□□□ -1.62
ATG4DQ86TL0 AP001029.2-203ENST00000589795 4910 ntBASIC4.92□□□□□ -1.62
ATG4DQ86TL0 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC4.92□□□□□ -1.62
ATG4DQ86TL0 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC4.92□□□□□ -1.62
ATG4DQ86TL0 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC4.92□□□□□ -1.62
ATG4DQ86TL0 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
ATG4DQ86TL0 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
ATG4DQ86TL0 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
ATG4DQ86TL0 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
ATG4DQ86TL0 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
ATG4DQ86TL0 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
ATG4DQ86TL0 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.92□□□□□ -1.62
ATG4DQ86TL0 Y_RNA.150-201ENST00000363562 102 ntBASIC4.92□□□□□ -1.62
ATG4DQ86TL0 RNU1-85P-201ENST00000364127 164 ntBASIC4.92□□□□□ -1.62
ATG4DQ86TL0 RNU6-200P-201ENST00000364743 107 ntBASIC4.92□□□□□ -1.62
ATG4DQ86TL0 Y_RNA.380-201ENST00000365663 111 ntBASIC4.92□□□□□ -1.62
ATG4DQ86TL0 RNU6-1207P-201ENST00000384343 107 ntBASIC4.92□□□□□ -1.62
ATG4DQ86TL0 RNU6-171P-201ENST00000384354 107 ntBASIC4.92□□□□□ -1.62
ATG4DQ86TL0 RPL21P1-201ENST00000399532 476 ntBASIC4.92□□□□□ -1.62
ATG4DQ86TL0 MIR450B-201ENST00000401182 78 ntBASIC4.92□□□□□ -1.62
ATG4DQ86TL0 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
ATG4DQ86TL0 AL078604.1-201ENST00000404609 466 ntBASIC4.92□□□□□ -1.62
ATG4DQ86TL0 MIR1302-6-201ENST00000408466 90 ntBASIC4.92□□□□□ -1.62
ATG4DQ86TL0 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms