Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 OR5BM1P-201ENST00000512021 366 ntBASIC4.82□□□□□ -1.64
KRT28Q7Z3Y7 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.82□□□□□ -1.64
KRT28Q7Z3Y7 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.82□□□□□ -1.64
KRT28Q7Z3Y7 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.82□□□□□ -1.64
KRT28Q7Z3Y7 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.82□□□□□ -1.64
KRT28Q7Z3Y7 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC4.82□□□□□ -1.64
KRT28Q7Z3Y7 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC4.82□□□□□ -1.64
KRT28Q7Z3Y7 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC4.82□□□□□ -1.64
KRT28Q7Z3Y7 MIR4504-201ENST00000577413 92 ntBASIC4.82□□□□□ -1.64
KRT28Q7Z3Y7 SNORD39.3-201ENST00000584451 71 ntBASIC4.82□□□□□ -1.64
KRT28Q7Z3Y7 AP000811.1-201ENST00000603803 651 ntBASIC4.82□□□□□ -1.64
KRT28Q7Z3Y7 AC012603.1-201ENST00000606424 528 ntBASIC4.82□□□□□ -1.64
KRT28Q7Z3Y7 AL359535.1-201ENST00000612100 1087 ntBASIC4.82□□□□□ -1.64
KRT28Q7Z3Y7 AC004223.4-201ENST00000612426 332 ntBASIC4.82□□□□□ -1.64
KRT28Q7Z3Y7 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC4.82□□□□□ -1.64
KRT28Q7Z3Y7 AL158196.1-201ENST00000616786 434 ntBASIC4.82□□□□□ -1.64
KRT28Q7Z3Y7 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.82□□□□□ -1.64
KRT28Q7Z3Y7 AC007494.3-201ENST00000624660 743 ntBASIC4.82□□□□□ -1.64
KRT28Q7Z3Y7 AC068137.4-201ENST00000638485 296 ntBASIC4.82□□□□□ -1.64
KRT28Q7Z3Y7 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
KRT28Q7Z3Y7 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
KRT28Q7Z3Y7 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
KRT28Q7Z3Y7 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
KRT28Q7Z3Y7 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
KRT28Q7Z3Y7 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
KRT28Q7Z3Y7 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
KRT28Q7Z3Y7 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.81□□□□□ -1.64
KRT28Q7Z3Y7 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
KRT28Q7Z3Y7 AC114546.3-201ENST00000623582 1734 ntBASIC4.81□□□□□ -1.64
KRT28Q7Z3Y7 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
KRT28Q7Z3Y7 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.81□□□□□ -1.64
KRT28Q7Z3Y7 AC011266.1-201ENST00000624119 3569 ntBASIC4.81□□□□□ -1.64
KRT28Q7Z3Y7 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
KRT28Q7Z3Y7 Y_RNA.18-201ENST00000362461 102 ntBASIC4.81□□□□□ -1.64
KRT28Q7Z3Y7 MIR506-201ENST00000384998 124 ntBASIC4.81□□□□□ -1.64
KRT28Q7Z3Y7 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
KRT28Q7Z3Y7 AL121834.1-202ENST00000404494 277 ntBASIC4.81□□□□□ -1.64
KRT28Q7Z3Y7 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
KRT28Q7Z3Y7 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.81□□□□□ -1.64
KRT28Q7Z3Y7 AC017079.2-201ENST00000416102 485 ntBASIC4.81□□□□□ -1.64
KRT28Q7Z3Y7 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC4.81□□□□□ -1.64
KRT28Q7Z3Y7 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.81□□□□□ -1.64
KRT28Q7Z3Y7 AC011742.1-201ENST00000431448 434 ntBASIC4.81□□□□□ -1.64
KRT28Q7Z3Y7 MTCYBP39-201ENST00000437562 491 ntBASIC4.81□□□□□ -1.64
KRT28Q7Z3Y7 MTCO1P48-201ENST00000448024 1096 ntBASIC4.81□□□□□ -1.64
KRT28Q7Z3Y7 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.81□□□□□ -1.64
KRT28Q7Z3Y7 RPL30P6-201ENST00000475925 342 ntBASIC4.81□□□□□ -1.64
KRT28Q7Z3Y7 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.81□□□□□ -1.64
KRT28Q7Z3Y7 AC011825.1-201ENST00000484967 388 ntBASIC4.81□□□□□ -1.64
KRT28Q7Z3Y7 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC4.81□□□□□ -1.64
KRT28Q7Z3Y7 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.81□□□□□ -1.64
KRT28Q7Z3Y7 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC4.81□□□□□ -1.64
KRT28Q7Z3Y7 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC4.81□□□□□ -1.64
KRT28Q7Z3Y7 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.81□□□□□ -1.64
KRT28Q7Z3Y7 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC4.81□□□□□ -1.64
KRT28Q7Z3Y7 AC007954.1-201ENST00000554198 494 ntBASIC4.81□□□□□ -1.64
KRT28Q7Z3Y7 MTND6P33-201ENST00000571794 183 ntBASIC4.81□□□□□ -1.64
KRT28Q7Z3Y7 MIR5004-201ENST00000579078 107 ntBASIC4.81□□□□□ -1.64
KRT28Q7Z3Y7 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.81□□□□□ -1.64
KRT28Q7Z3Y7 AL451007.1-201ENST00000595491 289 ntBASIC4.81□□□□□ -1.64
KRT28Q7Z3Y7 AL590229.1-201ENST00000603497 542 ntBASIC4.81□□□□□ -1.64
KRT28Q7Z3Y7 AP001521.1-201ENST00000609150 300 ntBASIC4.81□□□□□ -1.64
KRT28Q7Z3Y7 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.81□□□□□ -1.64
KRT28Q7Z3Y7 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC4.81□□□□□ -1.64
KRT28Q7Z3Y7 AC008083.4-201ENST00000615076 444 ntBASIC4.81□□□□□ -1.64
KRT28Q7Z3Y7 AC006386.2-201ENST00000624491 75 ntBASIC4.81□□□□□ -1.64
KRT28Q7Z3Y7 AC012005.1-201ENST00000624575 75 ntBASIC4.81□□□□□ -1.64
KRT28Q7Z3Y7 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC4.81□□□□□ -1.64
KRT28Q7Z3Y7 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
KRT28Q7Z3Y7 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.81□□□□□ -1.64
KRT28Q7Z3Y7 AC004944.1-201ENST00000517807 3059 ntBASIC4.81□□□□□ -1.64
KRT28Q7Z3Y7 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
KRT28Q7Z3Y7 AL451142.2-201ENST00000429076 2090 ntBASIC4.81□□□□□ -1.64
KRT28Q7Z3Y7 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
KRT28Q7Z3Y7 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
KRT28Q7Z3Y7 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
KRT28Q7Z3Y7 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.8□□□□□ -1.64
KRT28Q7Z3Y7 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRT28Q7Z3Y7 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
KRT28Q7Z3Y7 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.8□□□□□ -1.64
KRT28Q7Z3Y7 AC011477.1-204ENST00000623416 1325 ntBASIC4.8□□□□□ -1.64
KRT28Q7Z3Y7 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.8□□□□□ -1.64
KRT28Q7Z3Y7 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
KRT28Q7Z3Y7 FRG1CP-201ENST00000358464 769 ntBASIC4.8□□□□□ -1.64
KRT28Q7Z3Y7 SNORD116-9-201ENST00000384000 95 ntBASIC4.8□□□□□ -1.64
KRT28Q7Z3Y7 RNU6-1293P-201ENST00000384077 107 ntBASIC4.8□□□□□ -1.64
KRT28Q7Z3Y7 SNORD116-3-201ENST00000384287 95 ntBASIC4.8□□□□□ -1.64
KRT28Q7Z3Y7 SNORD116-7-201ENST00000384404 95 ntBASIC4.8□□□□□ -1.64
KRT28Q7Z3Y7 SNORD116-5-201ENST00000384462 95 ntBASIC4.8□□□□□ -1.64
KRT28Q7Z3Y7 RNU6-441P-201ENST00000384545 106 ntBASIC4.8□□□□□ -1.64
KRT28Q7Z3Y7 HLFP1-201ENST00000402375 499 ntBASIC4.8□□□□□ -1.64
KRT28Q7Z3Y7 SEPT2P1-201ENST00000419651 180 ntBASIC4.8□□□□□ -1.64
KRT28Q7Z3Y7 DNAJA1P2-201ENST00000421360 1197 ntBASIC4.8□□□□□ -1.64
KRT28Q7Z3Y7 BX119904.4-201ENST00000424402 301 ntBASIC4.8□□□□□ -1.64
KRT28Q7Z3Y7 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4.8□□□□□ -1.64
KRT28Q7Z3Y7 RPS20P1-201ENST00000434853 354 ntBASIC4.8□□□□□ -1.64
KRT28Q7Z3Y7 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.8□□□□□ -1.64
KRT28Q7Z3Y7 ELOCP8-201ENST00000439309 332 ntBASIC4.8□□□□□ -1.64
KRT28Q7Z3Y7 ELOCP15-201ENST00000442090 332 ntBASIC4.8□□□□□ -1.64
KRT28Q7Z3Y7 AC118469.1-201ENST00000442943 488 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms