Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 MTND5P29-201ENST00000458676 1807 ntBASIC3.28□□□□□ -1.88
CDC42BPAQ5VT25 AL450326.2-201ENST00000421913 1962 ntBASIC3.28□□□□□ -1.88
CDC42BPAQ5VT25 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CDC42BPAQ5VT25 MTCO1P9-201ENST00000505577 1534 ntBASIC3.28□□□□□ -1.89
CDC42BPAQ5VT25 AC025125.1-201ENST00000624743 1922 ntBASIC3.28□□□□□ -1.89
CDC42BPAQ5VT25 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC3.28□□□□□ -1.89
CDC42BPAQ5VT25 DEFA7P-201ENST00000382676 285 ntBASIC3.27□□□□□ -1.89
CDC42BPAQ5VT25 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CDC42BPAQ5VT25 RNU1-138P-201ENST00000384093 164 ntBASIC3.27□□□□□ -1.89
CDC42BPAQ5VT25 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.27□□□□□ -1.89
CDC42BPAQ5VT25 RPL7P53-201ENST00000421245 739 ntBASIC3.27□□□□□ -1.89
CDC42BPAQ5VT25 AC090819.1-201ENST00000523800 1111 ntBASIC3.27□□□□□ -1.89
CDC42BPAQ5VT25 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.27□□□□□ -1.89
CDC42BPAQ5VT25 AL451074.6-201ENST00000608512 729 ntBASIC3.27□□□□□ -1.89
CDC42BPAQ5VT25 CU459211.1-201ENST00000635667 749 ntBASIC3.27□□□□□ -1.89
CDC42BPAQ5VT25 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CDC42BPAQ5VT25 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.27□□□□□ -1.89
CDC42BPAQ5VT25 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.27□□□□□ -1.89
CDC42BPAQ5VT25 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC3.27□□□□□ -1.89
CDC42BPAQ5VT25 RPL7P52-201ENST00000449200 742 ntBASIC3.27□□□□□ -1.89
CDC42BPAQ5VT25 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.27□□□□□ -1.89
CDC42BPAQ5VT25 Y_RNA.673-201ENST00000516306 88 ntBASIC3.27□□□□□ -1.89
CDC42BPAQ5VT25 Y_RNA.676-201ENST00000516393 96 ntBASIC3.27□□□□□ -1.89
CDC42BPAQ5VT25 OR4R2P-201ENST00000530815 597 ntBASIC3.27□□□□□ -1.89
CDC42BPAQ5VT25 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.27□□□□□ -1.89
CDC42BPAQ5VT25 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC3.27□□□□□ -1.89
CDC42BPAQ5VT25 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC3.27□□□□□ -1.89
CDC42BPAQ5VT25 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.26□□□□□ -1.89
CDC42BPAQ5VT25 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
CDC42BPAQ5VT25 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
CDC42BPAQ5VT25 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CDC42BPAQ5VT25 RPS27AP9-201ENST00000477681 438 ntBASIC3.26□□□□□ -1.89
CDC42BPAQ5VT25 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.26□□□□□ -1.89
CDC42BPAQ5VT25 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.26□□□□□ -1.89
CDC42BPAQ5VT25 AC068339.2-201ENST00000534395 618 ntBASIC3.26□□□□□ -1.89
CDC42BPAQ5VT25 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.26□□□□□ -1.89
CDC42BPAQ5VT25 VN1R9P-201ENST00000614184 867 ntBASIC3.26□□□□□ -1.89
CDC42BPAQ5VT25 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC3.26□□□□□ -1.89
CDC42BPAQ5VT25 CYP3A51P-201ENST00000633513 256 ntBASIC3.26□□□□□ -1.89
CDC42BPAQ5VT25 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
CDC42BPAQ5VT25 AC092447.7-201ENST00000422212 1621 ntBASIC3.26□□□□□ -1.89
CDC42BPAQ5VT25 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CDC42BPAQ5VT25 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
CDC42BPAQ5VT25 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC3.26□□□□□ -1.89
CDC42BPAQ5VT25 MTND5P28-201ENST00000438005 1594 ntBASIC3.25□□□□□ -1.89
CDC42BPAQ5VT25 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CDC42BPAQ5VT25 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CDC42BPAQ5VT25 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.25□□□□□ -1.89
CDC42BPAQ5VT25 AL161781.1-201ENST00000354277 403 ntBASIC3.25□□□□□ -1.89
CDC42BPAQ5VT25 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
CDC42BPAQ5VT25 DHFRP5-201ENST00000406944 564 ntBASIC3.25□□□□□ -1.89
CDC42BPAQ5VT25 TRGV5P-201ENST00000419915 354 ntBASIC3.25□□□□□ -1.89
CDC42BPAQ5VT25 AL031736.2-201ENST00000426573 787 ntBASIC3.25□□□□□ -1.89
CDC42BPAQ5VT25 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.25□□□□□ -1.89
CDC42BPAQ5VT25 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.25□□□□□ -1.89
CDC42BPAQ5VT25 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CDC42BPAQ5VT25 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.25□□□□□ -1.89
CDC42BPAQ5VT25 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.25□□□□□ -1.89
CDC42BPAQ5VT25 AC026412.2-201ENST00000512270 1075 ntBASIC3.25□□□□□ -1.89
CDC42BPAQ5VT25 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.25□□□□□ -1.89
CDC42BPAQ5VT25 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.25□□□□□ -1.89
CDC42BPAQ5VT25 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC3.25□□□□□ -1.89
CDC42BPAQ5VT25 AL160237.3-201ENST00000604114 1013 ntBASIC3.25□□□□□ -1.89
CDC42BPAQ5VT25 AP004247.3-201ENST00000608682 624 ntBASIC3.25□□□□□ -1.89
CDC42BPAQ5VT25 VN1R7P-201ENST00000619242 903 ntBASIC3.25□□□□□ -1.89
CDC42BPAQ5VT25 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CDC42BPAQ5VT25 AL356292.1-201ENST00000283110 373 ntBASIC3.24□□□□□ -1.89
CDC42BPAQ5VT25 RNU1-51P-201ENST00000365345 176 ntBASIC3.24□□□□□ -1.89
CDC42BPAQ5VT25 SNORA67.3-201ENST00000384366 140 ntBASIC3.24□□□□□ -1.89
CDC42BPAQ5VT25 SNORA48.3-201ENST00000391081 134 ntBASIC3.24□□□□□ -1.89
CDC42BPAQ5VT25 AL121882.1-201ENST00000422893 417 ntBASIC3.24□□□□□ -1.89
CDC42BPAQ5VT25 USP9YP7-201ENST00000436723 430 ntBASIC3.24□□□□□ -1.89
CDC42BPAQ5VT25 USP9YP32-201ENST00000452432 430 ntBASIC3.24□□□□□ -1.89
CDC42BPAQ5VT25 TRBV26-201ENST00000456572 344 ntBASIC3.24□□□□□ -1.89
CDC42BPAQ5VT25 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.24□□□□□ -1.89
CDC42BPAQ5VT25 OR5D17P-201ENST00000531492 978 ntBASIC3.24□□□□□ -1.89
CDC42BPAQ5VT25 AC023043.3-201ENST00000593113 385 ntBASIC3.24□□□□□ -1.89
CDC42BPAQ5VT25 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CDC42BPAQ5VT25 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
CDC42BPAQ5VT25 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.24□□□□□ -1.89
CDC42BPAQ5VT25 AL118520.1-201ENST00000450770 291 ntBASIC3.24□□□□□ -1.89
CDC42BPAQ5VT25 AC091179.1-201ENST00000461606 579 ntBASIC3.24□□□□□ -1.89
CDC42BPAQ5VT25 SEPT7P6-201ENST00000469999 1143 ntBASIC3.24□□□□□ -1.89
CDC42BPAQ5VT25 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.24□□□□□ -1.89
CDC42BPAQ5VT25 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.24□□□□□ -1.89
CDC42BPAQ5VT25 AC091564.4-201ENST00000533934 2194 ntBASIC3.24□□□□□ -1.89
CDC42BPAQ5VT25 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.24□□□□□ -1.89
CDC42BPAQ5VT25 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CDC42BPAQ5VT25 U8.9-201ENST00000365667 134 ntBASIC3.23□□□□□ -1.89
CDC42BPAQ5VT25 RNA5SP344-201ENST00000411081 104 ntBASIC3.23□□□□□ -1.89
CDC42BPAQ5VT25 YWHAZP7-201ENST00000436906 631 ntBASIC3.23□□□□□ -1.89
CDC42BPAQ5VT25 AL138787.1-202ENST00000437804 898 ntBASIC3.23□□□□□ -1.89
CDC42BPAQ5VT25 CKS1BP2-201ENST00000497342 240 ntBASIC3.23□□□□□ -1.89
CDC42BPAQ5VT25 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC3.23□□□□□ -1.89
CDC42BPAQ5VT25 HSPE1P18-201ENST00000517602 280 ntBASIC3.23□□□□□ -1.89
CDC42BPAQ5VT25 AL022099.1-201ENST00000604551 712 ntBASIC3.23□□□□□ -1.89
CDC42BPAQ5VT25 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3.23□□□□□ -1.89
CDC42BPAQ5VT25 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CDC42BPAQ5VT25 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
CDC42BPAQ5VT25 SAR1AP2-201ENST00000392696 594 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms