Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.65□□□□□ -1.83
PDX1P52945 RPL23AP33-201ENST00000442301 452 ntBASIC3.65□□□□□ -1.83
PDX1P52945 AL590399.6-201ENST00000446396 307 ntBASIC3.65□□□□□ -1.83
PDX1P52945 RPS17P13-201ENST00000448974 407 ntBASIC3.65□□□□□ -1.83
PDX1P52945 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.65□□□□□ -1.83
PDX1P52945 AC007967.1-201ENST00000455422 1159 ntBASIC3.65□□□□□ -1.83
PDX1P52945 AC097493.1-201ENST00000463958 372 ntBASIC3.65□□□□□ -1.83
PDX1P52945 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PDX1P52945 RPL21P103-201ENST00000479921 488 ntBASIC3.65□□□□□ -1.83
PDX1P52945 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.65□□□□□ -1.83
PDX1P52945 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.65□□□□□ -1.83
PDX1P52945 AC074250.1-201ENST00000511117 192 ntBASIC3.65□□□□□ -1.83
PDX1P52945 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.65□□□□□ -1.83
PDX1P52945 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.65□□□□□ -1.83
PDX1P52945 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.65□□□□□ -1.83
PDX1P52945 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PDX1P52945 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.65□□□□□ -1.83
PDX1P52945 EMP1-206ENST00000537612 505 ntTSL 3 BASIC3.65□□□□□ -1.83
PDX1P52945 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PDX1P52945 OSBPL9P5-201ENST00000542581 171 ntBASIC3.65□□□□□ -1.83
PDX1P52945 AC107016.1-201ENST00000550463 337 ntBASIC3.65□□□□□ -1.83
PDX1P52945 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.65□□□□□ -1.83
PDX1P52945 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.65□□□□□ -1.83
PDX1P52945 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.65□□□□□ -1.83
PDX1P52945 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.65□□□□□ -1.83
PDX1P52945 BNIP3P24-201ENST00000593398 557 ntBASIC3.65□□□□□ -1.83
PDX1P52945 AL009028.1-201ENST00000604895 802 ntBASIC3.65□□□□□ -1.83
PDX1P52945 AC092354.2-201ENST00000607786 514 ntBASIC3.65□□□□□ -1.83
PDX1P52945 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.65□□□□□ -1.83
PDX1P52945 MIR7975-201ENST00000619350 68 ntBASIC3.65□□□□□ -1.83
PDX1P52945 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.65□□□□□ -1.83
PDX1P52945 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.65□□□□□ -1.83
PDX1P52945 CU459211.1-201ENST00000635667 749 ntBASIC3.65□□□□□ -1.83
PDX1P52945 AC007671.2-201ENST00000637344 619 ntBASIC3.65□□□□□ -1.83
PDX1P52945 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.65□□□□□ -1.83
PDX1P52945 AC027287.1-201ENST00000553115 1453 ntBASIC3.65□□□□□ -1.83
PDX1P52945 ZNF736P9Y-201ENST00000439586 1345 ntBASIC3.65□□□□□ -1.83
PDX1P52945 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PDX1P52945 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PDX1P52945 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PDX1P52945 ZNF734P-201ENST00000419494 1534 ntBASIC3.65□□□□□ -1.83
PDX1P52945 FAM35DP-201ENST00000323387 2712 ntBASIC3.64□□□□□ -1.83
PDX1P52945 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PDX1P52945 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.64□□□□□ -1.83
PDX1P52945 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.64□□□□□ -1.83
PDX1P52945 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PDX1P52945 OR4G11P-202ENST00000642116 1414 ntBASIC3.64□□□□□ -1.83
PDX1P52945 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.64□□□□□ -1.83
PDX1P52945 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PDX1P52945 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
PDX1P52945 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
PDX1P52945 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
PDX1P52945 RNU6-263P-201ENST00000363811 107 ntBASIC3.64□□□□□ -1.83
PDX1P52945 RNA5SP72-201ENST00000364442 117 ntBASIC3.64□□□□□ -1.83
PDX1P52945 Y_RNA.493-201ENST00000384422 102 ntBASIC3.64□□□□□ -1.83
PDX1P52945 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.64□□□□□ -1.83
PDX1P52945 AL356131.1-201ENST00000405826 414 ntBASIC3.64□□□□□ -1.83
PDX1P52945 RNU4-72P-201ENST00000410754 173 ntBASIC3.64□□□□□ -1.83
PDX1P52945 RPL31P45-201ENST00000419532 356 ntBASIC3.64□□□□□ -1.83
PDX1P52945 MTND2P18-201ENST00000419962 1030 ntBASIC3.64□□□□□ -1.83
PDX1P52945 OFD1P18Y-201ENST00000420889 959 ntBASIC3.64□□□□□ -1.83
PDX1P52945 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.64□□□□□ -1.83
PDX1P52945 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.64□□□□□ -1.83
PDX1P52945 AL356535.1-201ENST00000440335 398 ntBASIC3.64□□□□□ -1.83
PDX1P52945 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.64□□□□□ -1.83
PDX1P52945 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.64□□□□□ -1.83
PDX1P52945 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.64□□□□□ -1.83
PDX1P52945 MTND2P19-201ENST00000449129 1012 ntBASIC3.64□□□□□ -1.83
PDX1P52945 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.64□□□□□ -1.83
PDX1P52945 USP9YP34-201ENST00000453983 808 ntBASIC3.64□□□□□ -1.83
PDX1P52945 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC3.64□□□□□ -1.83
PDX1P52945 MTCO3P11-201ENST00000455103 774 ntBASIC3.64□□□□□ -1.83
PDX1P52945 RNU7-136P-201ENST00000458819 69 ntBASIC3.64□□□□□ -1.83
PDX1P52945 LINC00888-204ENST00000487386 421 ntBASIC3.64□□□□□ -1.83
PDX1P52945 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.64□□□□□ -1.83
PDX1P52945 AC104685.1-201ENST00000502445 371 ntBASIC3.64□□□□□ -1.83
PDX1P52945 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.64□□□□□ -1.83
PDX1P52945 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.64□□□□□ -1.83
PDX1P52945 LTV1P1-201ENST00000510683 1237 ntBASIC3.64□□□□□ -1.83
PDX1P52945 AC026412.2-201ENST00000512270 1075 ntBASIC3.64□□□□□ -1.83
PDX1P52945 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.64□□□□□ -1.83
PDX1P52945 RN7SKP18-201ENST00000516005 275 ntBASIC3.64□□□□□ -1.83
PDX1P52945 RNU6-150P-201ENST00000516237 95 ntBASIC3.64□□□□□ -1.83
PDX1P52945 RNU6-759P-201ENST00000516740 103 ntBASIC3.64□□□□□ -1.83
PDX1P52945 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.64□□□□□ -1.83
PDX1P52945 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.64□□□□□ -1.83
PDX1P52945 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC3.64□□□□□ -1.83
PDX1P52945 HSPE1P3-201ENST00000559254 309 ntBASIC3.64□□□□□ -1.83
PDX1P52945 AL360157.1-201ENST00000565962 87 ntBASIC3.64□□□□□ -1.83
PDX1P52945 ISCA1P3-201ENST00000577104 373 ntBASIC3.64□□□□□ -1.83
PDX1P52945 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.64□□□□□ -1.83
PDX1P52945 AC020914.6-201ENST00000594327 272 ntBASIC3.64□□□□□ -1.83
PDX1P52945 BNIP3P11-201ENST00000603878 563 ntBASIC3.64□□□□□ -1.83
PDX1P52945 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.64□□□□□ -1.83
PDX1P52945 AL442067.2-201ENST00000614033 363 ntBASIC3.64□□□□□ -1.83
PDX1P52945 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC3.64□□□□□ -1.83
PDX1P52945 AC025588.4-201ENST00000615802 908 ntBASIC3.64□□□□□ -1.83
PDX1P52945 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.64□□□□□ -1.83
PDX1P52945 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.64□□□□□ -1.83
PDX1P52945 AC103858.2-201ENST00000621471 543 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms