Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.66□□□□□ -1.5
BMP3P12645 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC5.66□□□□□ -1.5
BMP3P12645 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.66□□□□□ -1.5
BMP3P12645 AL121950.1-201ENST00000624993 2077 ntBASIC5.66□□□□□ -1.5
BMP3P12645 AC008758.3-201ENST00000507003 1829 ntBASIC5.66□□□□□ -1.5
BMP3P12645 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
BMP3P12645 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
BMP3P12645 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.66□□□□□ -1.5
BMP3P12645 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
BMP3P12645 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
BMP3P12645 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
BMP3P12645 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
BMP3P12645 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
BMP3P12645 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
BMP3P12645 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
BMP3P12645 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
BMP3P12645 MFSD8-216ENST00000641147 4009 ntBASIC5.65□□□□□ -1.5
BMP3P12645 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.65□□□□□ -1.5
BMP3P12645 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
BMP3P12645 AL022311.1-201ENST00000623726 19416 ntBASIC5.65□□□□□ -1.5
BMP3P12645 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
BMP3P12645 RNU6-343P-201ENST00000364709 104 ntBASIC5.65□□□□□ -1.5
BMP3P12645 RNU6-398P-201ENST00000384143 109 ntBASIC5.65□□□□□ -1.5
BMP3P12645 Y_RNA.557-201ENST00000384680 107 ntBASIC5.65□□□□□ -1.5
BMP3P12645 AC013442.1-201ENST00000397347 228 ntBASIC5.65□□□□□ -1.5
BMP3P12645 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
BMP3P12645 RPL21P67-201ENST00000402896 478 ntBASIC5.65□□□□□ -1.5
BMP3P12645 RPS16P5-201ENST00000406501 404 ntBASIC5.65□□□□□ -1.5
BMP3P12645 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
BMP3P12645 MIR548K-201ENST00000408406 116 ntBASIC5.65□□□□□ -1.5
BMP3P12645 RNU6-370P-201ENST00000411008 104 ntBASIC5.65□□□□□ -1.5
BMP3P12645 BX510359.2-201ENST00000417920 305 ntBASIC5.65□□□□□ -1.5
BMP3P12645 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC5.65□□□□□ -1.5
BMP3P12645 AC005154.2-201ENST00000438110 379 ntBASIC5.65□□□□□ -1.5
BMP3P12645 AC002381.1-201ENST00000447049 280 ntBASIC5.65□□□□□ -1.5
BMP3P12645 MTCO3P10-201ENST00000455912 772 ntBASIC5.65□□□□□ -1.5
BMP3P12645 CEACAMP4-201ENST00000457676 421 ntBASIC5.65□□□□□ -1.5
BMP3P12645 AC006512.1-201ENST00000468816 291 ntBASIC5.65□□□□□ -1.5
BMP3P12645 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.65□□□□□ -1.5
BMP3P12645 UBA52P3-201ENST00000491303 382 ntBASIC5.65□□□□□ -1.5
BMP3P12645 AL049874.2-201ENST00000492636 288 ntBASIC5.65□□□□□ -1.5
BMP3P12645 AC106872.2-201ENST00000494303 480 ntBASIC5.65□□□□□ -1.5
BMP3P12645 SUMO2P4-201ENST00000504193 276 ntBASIC5.65□□□□□ -1.5
BMP3P12645 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
BMP3P12645 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC5.65□□□□□ -1.5
BMP3P12645 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC5.65□□□□□ -1.5
BMP3P12645 RNU4ATAC8P-201ENST00000516196 109 ntBASIC5.65□□□□□ -1.5
BMP3P12645 RNU6-864P-201ENST00000516256 108 ntBASIC5.65□□□□□ -1.5
BMP3P12645 Y_RNA.682-201ENST00000516457 100 ntBASIC5.65□□□□□ -1.5
BMP3P12645 RNU6-410P-201ENST00000517006 107 ntBASIC5.65□□□□□ -1.5
BMP3P12645 AC009902.1-201ENST00000519351 183 ntBASIC5.65□□□□□ -1.5
BMP3P12645 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.65□□□□□ -1.5
BMP3P12645 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
BMP3P12645 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.65□□□□□ -1.5
BMP3P12645 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC5.65□□□□□ -1.5
BMP3P12645 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC5.65□□□□□ -1.5
BMP3P12645 AL049839.1-201ENST00000556151 657 ntBASIC5.65□□□□□ -1.5
BMP3P12645 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC5.65□□□□□ -1.5
BMP3P12645 NCAPGP2-201ENST00000557911 754 ntBASIC5.65□□□□□ -1.5
BMP3P12645 SULT1C2P1-202ENST00000562418 459 ntBASIC5.65□□□□□ -1.5
BMP3P12645 MYL12BP1-201ENST00000569826 507 ntBASIC5.65□□□□□ -1.5
BMP3P12645 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.65□□□□□ -1.5
BMP3P12645 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC5.65□□□□□ -1.5
BMP3P12645 AC234771.5-201ENST00000600161 514 ntBASIC5.65□□□□□ -1.5
BMP3P12645 FAM27B-201ENST00000610601 213 ntBASIC5.65□□□□□ -1.5
BMP3P12645 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
BMP3P12645 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
BMP3P12645 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
BMP3P12645 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.65□□□□□ -1.51
BMP3P12645 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
BMP3P12645 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
BMP3P12645 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.65□□□□□ -1.51
BMP3P12645 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.64□□□□□ -1.51
BMP3P12645 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
BMP3P12645 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
BMP3P12645 AC005261.2-201ENST00000593427 4258 ntBASIC5.64□□□□□ -1.51
BMP3P12645 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
BMP3P12645 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
BMP3P12645 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
BMP3P12645 AC090337.1-201ENST00000579651 2074 ntBASIC5.64□□□□□ -1.51
BMP3P12645 AC245100.2-201ENST00000454544 1679 ntBASIC5.64□□□□□ -1.51
BMP3P12645 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
BMP3P12645 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
BMP3P12645 RNU6-522P-201ENST00000364497 107 ntBASIC5.64□□□□□ -1.51
BMP3P12645 RNU6-744P-201ENST00000365557 107 ntBASIC5.64□□□□□ -1.51
BMP3P12645 Y_RNA.373-201ENST00000365600 103 ntBASIC5.64□□□□□ -1.51
BMP3P12645 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
BMP3P12645 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
BMP3P12645 RNU6-1316P-201ENST00000384242 108 ntBASIC5.64□□□□□ -1.51
BMP3P12645 SNORD37.1-201ENST00000390968 65 ntBASIC5.64□□□□□ -1.51
BMP3P12645 MIR298-201ENST00000401212 88 ntBASIC5.64□□□□□ -1.51
BMP3P12645 MIR548F5-201ENST00000408421 86 ntBASIC5.64□□□□□ -1.51
BMP3P12645 HMGB3P2-201ENST00000411913 584 ntBASIC5.64□□□□□ -1.51
BMP3P12645 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC5.64□□□□□ -1.51
BMP3P12645 MRPS21P2-201ENST00000424704 264 ntBASIC5.64□□□□□ -1.51
BMP3P12645 AC006548.1-201ENST00000427470 102 ntBASIC5.64□□□□□ -1.51
BMP3P12645 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
BMP3P12645 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
BMP3P12645 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC5.64□□□□□ -1.51
BMP3P12645 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms