Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.96□□□□□ -1.62
SNRPA1P09661 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
SNRPA1P09661 AC022031.1-201ENST00000585985 2593 ntBASIC4.96□□□□□ -1.62
SNRPA1P09661 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.96□□□□□ -1.62
SNRPA1P09661 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.96□□□□□ -1.62
SNRPA1P09661 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.96□□□□□ -1.62
SNRPA1P09661 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SNRPA1P09661 RNY4P24-201ENST00000362735 96 ntBASIC4.96□□□□□ -1.62
SNRPA1P09661 RNU6-251P-201ENST00000363235 104 ntBASIC4.96□□□□□ -1.62
SNRPA1P09661 RNU6-259P-201ENST00000383999 107 ntBASIC4.96□□□□□ -1.62
SNRPA1P09661 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SNRPA1P09661 MTND1P21-201ENST00000412991 285 ntBASIC4.96□□□□□ -1.62
SNRPA1P09661 HMGB1P11-201ENST00000413899 637 ntBASIC4.96□□□□□ -1.62
SNRPA1P09661 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC4.96□□□□□ -1.62
SNRPA1P09661 EIF1P1-201ENST00000421436 341 ntBASIC4.96□□□□□ -1.62
SNRPA1P09661 AC233981.1-201ENST00000423224 461 ntBASIC4.96□□□□□ -1.62
SNRPA1P09661 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC4.96□□□□□ -1.62
SNRPA1P09661 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC4.96□□□□□ -1.62
SNRPA1P09661 AC093392.2-201ENST00000450682 337 ntBASIC4.96□□□□□ -1.62
SNRPA1P09661 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC4.96□□□□□ -1.62
SNRPA1P09661 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.96□□□□□ -1.62
SNRPA1P09661 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.96□□□□□ -1.62
SNRPA1P09661 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC4.96□□□□□ -1.62
SNRPA1P09661 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.96□□□□□ -1.62
SNRPA1P09661 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC4.96□□□□□ -1.62
SNRPA1P09661 RN7SKP298-201ENST00000515950 94 ntBASIC4.96□□□□□ -1.62
SNRPA1P09661 RNU6-347P-201ENST00000516658 105 ntBASIC4.96□□□□□ -1.62
SNRPA1P09661 NRON-201ENST00000517270 370 ntBASIC4.96□□□□□ -1.62
SNRPA1P09661 AP002748.2-201ENST00000528671 348 ntBASIC4.96□□□□□ -1.62
SNRPA1P09661 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.96□□□□□ -1.62
SNRPA1P09661 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.96□□□□□ -1.62
SNRPA1P09661 AC090502.2-201ENST00000549267 280 ntBASIC4.96□□□□□ -1.62
SNRPA1P09661 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.96□□□□□ -1.62
SNRPA1P09661 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.96□□□□□ -1.62
SNRPA1P09661 MTND6P33-201ENST00000571794 183 ntBASIC4.96□□□□□ -1.62
SNRPA1P09661 AC017100.2-201ENST00000584628 355 ntBASIC4.96□□□□□ -1.62
SNRPA1P09661 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.96□□□□□ -1.62
SNRPA1P09661 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SNRPA1P09661 AC103710.4-201ENST00000609301 899 ntBASIC4.96□□□□□ -1.62
SNRPA1P09661 AC243654.2-201ENST00000612843 443 ntBASIC4.96□□□□□ -1.62
SNRPA1P09661 AC025125.1-201ENST00000624743 1922 ntBASIC4.95□□□□□ -1.62
SNRPA1P09661 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
SNRPA1P09661 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SNRPA1P09661 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SNRPA1P09661 SNORA70.4-201ENST00000365509 134 ntBASIC4.95□□□□□ -1.62
SNRPA1P09661 MIR506-201ENST00000384998 124 ntBASIC4.95□□□□□ -1.62
SNRPA1P09661 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.95□□□□□ -1.62
SNRPA1P09661 RNU2-28P-201ENST00000410457 189 ntBASIC4.95□□□□□ -1.62
SNRPA1P09661 AC093578.1-201ENST00000415219 368 ntBASIC4.95□□□□□ -1.62
SNRPA1P09661 OFD1P18Y-201ENST00000420889 959 ntBASIC4.95□□□□□ -1.62
SNRPA1P09661 YME1L1P1-201ENST00000429435 297 ntBASIC4.95□□□□□ -1.62
SNRPA1P09661 ZYG11AP1-201ENST00000430329 837 ntBASIC4.95□□□□□ -1.62
SNRPA1P09661 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
SNRPA1P09661 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.95□□□□□ -1.62
SNRPA1P09661 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC4.95□□□□□ -1.62
SNRPA1P09661 RPL7P31-201ENST00000450192 724 ntBASIC4.95□□□□□ -1.62
SNRPA1P09661 AC126182.1-201ENST00000478134 357 ntBASIC4.95□□□□□ -1.62
SNRPA1P09661 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC4.95□□□□□ -1.62
SNRPA1P09661 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC4.95□□□□□ -1.62
SNRPA1P09661 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.95□□□□□ -1.62
SNRPA1P09661 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC4.95□□□□□ -1.62
SNRPA1P09661 NTS-203ENST00000551529 801 ntTSL 3 BASIC4.95□□□□□ -1.62
SNRPA1P09661 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC4.95□□□□□ -1.62
SNRPA1P09661 AC091489.2-201ENST00000566263 604 ntBASIC4.95□□□□□ -1.62
SNRPA1P09661 MIR5187-201ENST00000583479 76 ntBASIC4.95□□□□□ -1.62
SNRPA1P09661 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.95□□□□□ -1.62
SNRPA1P09661 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.95□□□□□ -1.62
SNRPA1P09661 AC244100.1-202ENST00000621554 382 ntBASIC4.95□□□□□ -1.62
SNRPA1P09661 AC095031.1-201ENST00000623685 672 ntBASIC4.95□□□□□ -1.62
SNRPA1P09661 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.95□□□□□ -1.62
SNRPA1P09661 AC009093.8-201ENST00000641769 292 ntBASIC4.95□□□□□ -1.62
SNRPA1P09661 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.95□□□□□ -1.62
SNRPA1P09661 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
SNRPA1P09661 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SNRPA1P09661 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.95□□□□□ -1.62
SNRPA1P09661 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SNRPA1P09661 AC024560.2-201ENST00000507981 1497 ntBASIC4.94□□□□□ -1.62
SNRPA1P09661 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SNRPA1P09661 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SNRPA1P09661 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SNRPA1P09661 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
SNRPA1P09661 MIR208A-201ENST00000362287 71 ntBASIC4.94□□□□□ -1.62
SNRPA1P09661 RNU6-462P-201ENST00000362659 105 ntBASIC4.94□□□□□ -1.62
SNRPA1P09661 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.94□□□□□ -1.62
SNRPA1P09661 SNRPEP2-201ENST00000397592 279 ntBASIC4.94□□□□□ -1.62
SNRPA1P09661 AC083875.1-201ENST00000419509 405 ntBASIC4.94□□□□□ -1.62
SNRPA1P09661 AL596276.1-201ENST00000434465 418 ntBASIC4.94□□□□□ -1.62
SNRPA1P09661 AL022238.1-201ENST00000442557 355 ntBASIC4.94□□□□□ -1.62
SNRPA1P09661 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.94□□□□□ -1.62
SNRPA1P09661 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.94□□□□□ -1.62
SNRPA1P09661 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.94□□□□□ -1.62
SNRPA1P09661 KLF3P2-201ENST00000465138 268 ntBASIC4.94□□□□□ -1.62
SNRPA1P09661 TMED11P-201ENST00000479478 690 ntBASIC4.94□□□□□ -1.62
SNRPA1P09661 AF131216.2-201ENST00000512316 564 ntBASIC4.94□□□□□ -1.62
SNRPA1P09661 RNU6-150P-201ENST00000516237 95 ntBASIC4.94□□□□□ -1.62
SNRPA1P09661 RNA5SP164-201ENST00000516533 110 ntBASIC4.94□□□□□ -1.62
SNRPA1P09661 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.94□□□□□ -1.62
SNRPA1P09661 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.94□□□□□ -1.62
SNRPA1P09661 EEF1B2P4-201ENST00000551398 348 ntBASIC4.94□□□□□ -1.62
SNRPA1P09661 AC068446.3-201ENST00000555285 382 ntBASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms