Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
CLPTM1O96005 AC072039.1-201ENST00000477611 581 ntBASIC3.6□□□□□ -1.83
CLPTM1O96005 AC108078.3-201ENST00000502633 489 ntBASIC3.6□□□□□ -1.83
CLPTM1O96005 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.6□□□□□ -1.83
CLPTM1O96005 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.6□□□□□ -1.83
CLPTM1O96005 MTND5P13-201ENST00000513046 1079 ntBASIC3.6□□□□□ -1.83
CLPTM1O96005 AC099522.1-202ENST00000514718 367 ntBASIC3.6□□□□□ -1.83
CLPTM1O96005 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.6□□□□□ -1.83
CLPTM1O96005 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.6□□□□□ -1.83
CLPTM1O96005 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.6□□□□□ -1.83
CLPTM1O96005 AC105233.3-201ENST00000531125 744 ntBASIC3.6□□□□□ -1.83
CLPTM1O96005 OR7K1P-201ENST00000546439 926 ntBASIC3.6□□□□□ -1.83
CLPTM1O96005 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CLPTM1O96005 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.6□□□□□ -1.83
CLPTM1O96005 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.6□□□□□ -1.83
CLPTM1O96005 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.6□□□□□ -1.83
CLPTM1O96005 MTCYBP33-201ENST00000575007 1130 ntBASIC3.6□□□□□ -1.83
CLPTM1O96005 MIR4504-201ENST00000577413 92 ntBASIC3.6□□□□□ -1.83
CLPTM1O96005 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.6□□□□□ -1.83
CLPTM1O96005 RN7SL600P-201ENST00000581811 299 ntBASIC3.6□□□□□ -1.83
CLPTM1O96005 AC107982.3-201ENST00000584957 985 ntBASIC3.6□□□□□ -1.83
CLPTM1O96005 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.6□□□□□ -1.83
CLPTM1O96005 WISP1-OT1-201ENST00000602893 642 ntBASIC3.6□□□□□ -1.83
CLPTM1O96005 AC069304.2-201ENST00000605154 435 ntBASIC3.6□□□□□ -1.83
CLPTM1O96005 AC073114.1-201ENST00000612027 490 ntBASIC3.6□□□□□ -1.83
CLPTM1O96005 MIR6798-201ENST00000612887 67 ntBASIC3.6□□□□□ -1.83
CLPTM1O96005 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.6□□□□□ -1.83
CLPTM1O96005 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CLPTM1O96005 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CLPTM1O96005 AL390862.1-201ENST00000635467 1469 ntBASIC3.6□□□□□ -1.83
CLPTM1O96005 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.6□□□□□ -1.83
CLPTM1O96005 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CLPTM1O96005 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.59□□□□□ -1.83
CLPTM1O96005 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CLPTM1O96005 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CLPTM1O96005 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CLPTM1O96005 Y_RNA.18-201ENST00000362461 102 ntBASIC3.59□□□□□ -1.83
CLPTM1O96005 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CLPTM1O96005 SNORA70C-201ENST00000384538 135 ntBASIC3.59□□□□□ -1.83
CLPTM1O96005 MIR506-201ENST00000384998 124 ntBASIC3.59□□□□□ -1.83
CLPTM1O96005 MIR591-201ENST00000385290 95 ntBASIC3.59□□□□□ -1.83
CLPTM1O96005 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.59□□□□□ -1.83
CLPTM1O96005 RPL7AP73-201ENST00000413490 353 ntBASIC3.59□□□□□ -1.83
CLPTM1O96005 NPM1P11-201ENST00000417106 855 ntBASIC3.59□□□□□ -1.83
CLPTM1O96005 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.59□□□□□ -1.83
CLPTM1O96005 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.59□□□□□ -1.83
CLPTM1O96005 COX6CP15-201ENST00000426313 211 ntBASIC3.59□□□□□ -1.83
CLPTM1O96005 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.59□□□□□ -1.83
CLPTM1O96005 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.59□□□□□ -1.83
CLPTM1O96005 MTCO2P16-201ENST00000436962 677 ntBASIC3.59□□□□□ -1.83
CLPTM1O96005 MTND2P20-201ENST00000440805 661 ntBASIC3.59□□□□□ -1.83
CLPTM1O96005 AC006011.1-201ENST00000442758 349 ntBASIC3.59□□□□□ -1.83
CLPTM1O96005 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.59□□□□□ -1.83
CLPTM1O96005 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.59□□□□□ -1.83
CLPTM1O96005 MTCO1P48-201ENST00000448024 1096 ntBASIC3.59□□□□□ -1.83
CLPTM1O96005 MTND2P19-201ENST00000449129 1012 ntBASIC3.59□□□□□ -1.83
CLPTM1O96005 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.59□□□□□ -1.83
CLPTM1O96005 ARPC3P2-201ENST00000457786 533 ntBASIC3.59□□□□□ -1.83
CLPTM1O96005 snoU13.7-201ENST00000459220 104 ntBASIC3.59□□□□□ -1.83
CLPTM1O96005 AC092757.1-201ENST00000467293 467 ntBASIC3.59□□□□□ -1.83
CLPTM1O96005 SETP11-201ENST00000473027 690 ntBASIC3.59□□□□□ -1.83
CLPTM1O96005 RPS4XP22-201ENST00000480755 780 ntBASIC3.59□□□□□ -1.83
CLPTM1O96005 RPL31P13-201ENST00000484151 370 ntBASIC3.59□□□□□ -1.83
CLPTM1O96005 AC093267.1-201ENST00000489176 961 ntBASIC3.59□□□□□ -1.83
CLPTM1O96005 AC080014.1-201ENST00000496877 1201 ntBASIC3.59□□□□□ -1.83
CLPTM1O96005 RPS27AP13-201ENST00000498403 237 ntBASIC3.59□□□□□ -1.83
CLPTM1O96005 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.59□□□□□ -1.83
CLPTM1O96005 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.59□□□□□ -1.83
CLPTM1O96005 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.59□□□□□ -1.83
CLPTM1O96005 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CLPTM1O96005 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC3.59□□□□□ -1.83
CLPTM1O96005 MTCYBP43-201ENST00000513621 740 ntBASIC3.59□□□□□ -1.83
CLPTM1O96005 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.59□□□□□ -1.83
CLPTM1O96005 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.59□□□□□ -1.83
CLPTM1O96005 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.59□□□□□ -1.83
CLPTM1O96005 OR5AP1P-201ENST00000529730 940 ntBASIC3.59□□□□□ -1.83
CLPTM1O96005 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.59□□□□□ -1.83
CLPTM1O96005 OR6C73P-201ENST00000546432 358 ntBASIC3.59□□□□□ -1.83
CLPTM1O96005 AL121766.1-201ENST00000547436 487 ntBASIC3.59□□□□□ -1.83
CLPTM1O96005 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.59□□□□□ -1.83
CLPTM1O96005 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.59□□□□□ -1.83
CLPTM1O96005 AC007954.1-201ENST00000554198 494 ntBASIC3.59□□□□□ -1.83
CLPTM1O96005 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.59□□□□□ -1.83
CLPTM1O96005 TGIF1P1-201ENST00000558095 802 ntBASIC3.59□□□□□ -1.83
CLPTM1O96005 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC3.59□□□□□ -1.83
CLPTM1O96005 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.59□□□□□ -1.83
CLPTM1O96005 AC136624.4-201ENST00000573044 370 ntBASIC3.59□□□□□ -1.83
CLPTM1O96005 AC022655.2-201ENST00000577280 318 ntBASIC3.59□□□□□ -1.83
CLPTM1O96005 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.59□□□□□ -1.83
CLPTM1O96005 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.59□□□□□ -1.83
CLPTM1O96005 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.59□□□□□ -1.83
CLPTM1O96005 AC146944.4-201ENST00000602697 718 ntBASIC3.59□□□□□ -1.83
CLPTM1O96005 AP001981.2-201ENST00000603241 418 ntBASIC3.59□□□□□ -1.83
CLPTM1O96005 AC024560.3-201ENST00000608482 349 ntBASIC3.59□□□□□ -1.83
CLPTM1O96005 AL359535.1-201ENST00000612100 1087 ntBASIC3.59□□□□□ -1.83
CLPTM1O96005 AL731566.2-201ENST00000618971 317 ntBASIC3.59□□□□□ -1.83
CLPTM1O96005 PLCE1P1-201ENST00000622094 305 ntBASIC3.59□□□□□ -1.83
CLPTM1O96005 Z69908.1-201ENST00000622603 247 ntBASIC3.59□□□□□ -1.83
CLPTM1O96005 PCMTD1P7-201ENST00000634506 357 ntBASIC3.59□□□□□ -1.83
CLPTM1O96005 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms