Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 RPS3AP25-201ENST00000411660 793 ntBASIC2.73□□□□□ -1.97
SGCEO43556 SSXP9-201ENST00000417503 292 ntBASIC2.73□□□□□ -1.97
SGCEO43556 AL158156.1-201ENST00000422509 473 ntBASIC2.73□□□□□ -1.97
SGCEO43556 AC091862.1-201ENST00000438016 1100 ntBASIC2.73□□□□□ -1.97
SGCEO43556 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC2.73□□□□□ -1.97
SGCEO43556 AL591503.2-201ENST00000442314 1005 ntBASIC2.73□□□□□ -1.97
SGCEO43556 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC2.73□□□□□ -1.97
SGCEO43556 HSPD1P15-201ENST00000505573 1122 ntBASIC2.73□□□□□ -1.97
SGCEO43556 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC2.73□□□□□ -1.97
SGCEO43556 AC074250.1-201ENST00000511117 192 ntBASIC2.73□□□□□ -1.97
SGCEO43556 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.73□□□□□ -1.97
SGCEO43556 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.73□□□□□ -1.97
SGCEO43556 RNU4ATAC10P-201ENST00000516967 122 ntBASIC2.73□□□□□ -1.97
SGCEO43556 AC093014.1-201ENST00000548926 724 ntBASIC2.73□□□□□ -1.97
SGCEO43556 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.73□□□□□ -1.97
SGCEO43556 AC233266.2-201ENST00000567067 528 ntBASIC2.73□□□□□ -1.97
SGCEO43556 MTCO3P13-201ENST00000577757 781 ntBASIC2.73□□□□□ -1.97
SGCEO43556 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC2.73□□□□□ -1.97
SGCEO43556 AC012119.1-201ENST00000603184 222 ntBASIC2.73□□□□□ -1.97
SGCEO43556 PRELID3BP8-201ENST00000604148 295 ntBASIC2.73□□□□□ -1.97
SGCEO43556 AP001033.2-201ENST00000609701 1003 ntBASIC2.73□□□□□ -1.97
SGCEO43556 AC004696.1-201ENST00000614345 607 ntBASIC2.73□□□□□ -1.97
SGCEO43556 MIR6076-201ENST00000617521 113 ntBASIC2.73□□□□□ -1.97
SGCEO43556 AC073968.1-201ENST00000618594 637 ntBASIC2.73□□□□□ -1.97
SGCEO43556 AC099506.2-201ENST00000623074 221 ntBASIC2.73□□□□□ -1.97
SGCEO43556 ABBA01000935.2-201ENST00000637477 838 ntBASIC2.73□□□□□ -1.97
SGCEO43556 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
SGCEO43556 AC025263.3-201ENST00000622965 1396 ntBASIC2.73□□□□□ -1.97
SGCEO43556 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
SGCEO43556 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
SGCEO43556 CUL1P1-201ENST00000509510 2425 ntBASIC2.72□□□□□ -1.97
SGCEO43556 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
SGCEO43556 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.72□□□□□ -1.97
SGCEO43556 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC2.72□□□□□ -1.97
SGCEO43556 SNORA7.4-201ENST00000384249 137 ntBASIC2.72□□□□□ -1.97
SGCEO43556 RNVU1-14-201ENST00000384770 164 ntBASIC2.72□□□□□ -1.97
SGCEO43556 MIR649-201ENST00000384843 97 ntBASIC2.72□□□□□ -1.97
SGCEO43556 AC110754.1-201ENST00000399740 601 ntBASIC2.72□□□□□ -1.97
SGCEO43556 AL353692.2-201ENST00000407054 335 ntBASIC2.72□□□□□ -1.97
SGCEO43556 RNA5SP120-201ENST00000410900 112 ntBASIC2.72□□□□□ -1.97
SGCEO43556 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.72□□□□□ -1.97
SGCEO43556 AC245054.2-201ENST00000415639 319 ntBASIC2.72□□□□□ -1.97
SGCEO43556 AL096701.2-201ENST00000416920 238 ntBASIC2.72□□□□□ -1.97
SGCEO43556 FNDC3CP-201ENST00000420795 1155 ntBASIC2.72□□□□□ -1.97
SGCEO43556 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC2.72□□□□□ -1.97
SGCEO43556 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.72□□□□□ -1.97
SGCEO43556 AC114878.1-201ENST00000441166 358 ntBASIC2.72□□□□□ -1.97
SGCEO43556 RPS12P18-201ENST00000442381 270 ntBASIC2.72□□□□□ -1.97
SGCEO43556 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC2.72□□□□□ -1.97
SGCEO43556 AL358232.1-201ENST00000448030 501 ntBASIC2.72□□□□□ -1.97
SGCEO43556 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.72□□□□□ -1.97
SGCEO43556 RPS27AP9-201ENST00000477681 438 ntBASIC2.72□□□□□ -1.97
SGCEO43556 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC2.72□□□□□ -1.97
SGCEO43556 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
SGCEO43556 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC2.72□□□□□ -1.97
SGCEO43556 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.72□□□□□ -1.97
SGCEO43556 OSBPL9P3-201ENST00000534523 595 ntBASIC2.72□□□□□ -1.97
SGCEO43556 AC018630.1-201ENST00000541376 925 ntBASIC2.72□□□□□ -1.97
SGCEO43556 AC004217.3-201ENST00000551552 878 ntBASIC2.72□□□□□ -1.97
SGCEO43556 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC2.72□□□□□ -1.97
SGCEO43556 AC067805.1-201ENST00000559344 470 ntBASIC2.72□□□□□ -1.97
SGCEO43556 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC2.72□□□□□ -1.97
SGCEO43556 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.72□□□□□ -1.97
SGCEO43556 AC009570.1-201ENST00000609599 745 ntBASIC2.72□□□□□ -1.97
SGCEO43556 AC006249.1-201ENST00000621223 471 ntBASIC2.72□□□□□ -1.97
SGCEO43556 AC018692.3-201ENST00000623929 123 ntBASIC2.72□□□□□ -1.97
SGCEO43556 AC090740.1-201ENST00000623193 2262 ntBASIC2.72□□□□□ -1.97
SGCEO43556 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.72□□□□□ -1.97
SGCEO43556 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.71□□□□□ -1.97
SGCEO43556 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.71□□□□□ -1.98
SGCEO43556 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
SGCEO43556 CD24P4-201ENST00000382840 243 ntBASIC2.71□□□□□ -1.98
SGCEO43556 RNU6-1027P-201ENST00000383998 107 ntBASIC2.71□□□□□ -1.98
SGCEO43556 MIR23B-201ENST00000384832 97 ntBASIC2.71□□□□□ -1.98
SGCEO43556 MIR34B-201ENST00000385076 84 ntBASIC2.71□□□□□ -1.98
SGCEO43556 RPL7P25-201ENST00000404151 721 ntBASIC2.71□□□□□ -1.98
SGCEO43556 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
SGCEO43556 RNA5SP38-201ENST00000410750 119 ntBASIC2.71□□□□□ -1.98
SGCEO43556 RNA5SP492-201ENST00000411330 114 ntBASIC2.71□□□□□ -1.98
SGCEO43556 RPL19P1-201ENST00000411635 428 ntBASIC2.71□□□□□ -1.98
SGCEO43556 ATG3P1-201ENST00000419507 911 ntBASIC2.71□□□□□ -1.98
SGCEO43556 AC099677.1-201ENST00000420575 175 ntBASIC2.71□□□□□ -1.98
SGCEO43556 ARL2BPP3-201ENST00000421226 480 ntBASIC2.71□□□□□ -1.98
SGCEO43556 AL606495.1-201ENST00000422100 813 ntBASIC2.71□□□□□ -1.98
SGCEO43556 AC233981.1-201ENST00000423224 461 ntBASIC2.71□□□□□ -1.98
SGCEO43556 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.71□□□□□ -1.98
SGCEO43556 OFD1P12Y-201ENST00000427963 1207 ntBASIC2.71□□□□□ -1.98
SGCEO43556 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.71□□□□□ -1.98
SGCEO43556 OFD1P13Y-201ENST00000431179 1232 ntBASIC2.71□□□□□ -1.98
SGCEO43556 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC2.71□□□□□ -1.98
SGCEO43556 UQCRHP3-201ENST00000451503 251 ntBASIC2.71□□□□□ -1.98
SGCEO43556 RNA5SP310-201ENST00000459084 116 ntBASIC2.71□□□□□ -1.98
SGCEO43556 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.71□□□□□ -1.98
SGCEO43556 AL358832.1-201ENST00000497800 389 ntBASIC2.71□□□□□ -1.98
SGCEO43556 AC096751.1-202ENST00000502691 1067 ntBASIC2.71□□□□□ -1.98
SGCEO43556 MLLT10P2-201ENST00000506434 249 ntBASIC2.71□□□□□ -1.98
SGCEO43556 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
SGCEO43556 RNA5SP76-201ENST00000516277 87 ntBASIC2.71□□□□□ -1.98
SGCEO43556 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC2.71□□□□□ -1.98
SGCEO43556 AP001804.3-201ENST00000525146 880 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms