Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC2.22□□□□□ -2.05
SDCBPO00560 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC2.22□□□□□ -2.05
SDCBPO00560 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.22□□□□□ -2.05
SDCBPO00560 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.22□□□□□ -2.05
SDCBPO00560 AL137790.1-201ENST00000634283 177 ntBASIC2.22□□□□□ -2.05
SDCBPO00560 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC2.22□□□□□ -2.05
SDCBPO00560 AC119674.1-220ENST00000641502 1048 ntBASIC2.22□□□□□ -2.05
SDCBPO00560 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
SDCBPO00560 ZNF807-201ENST00000328088 1707 ntBASIC2.22□□□□□ -2.05
SDCBPO00560 ZNF37BP-203ENST00000452306 1352 ntBASIC2.22□□□□□ -2.05
SDCBPO00560 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC2.22□□□□□ -2.05
SDCBPO00560 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.21□□□□□ -2.05
SDCBPO00560 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.21□□□□□ -2.05
SDCBPO00560 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.21□□□□□ -2.06
SDCBPO00560 Y_RNA.333-201ENST00000365274 102 ntBASIC2.21□□□□□ -2.06
SDCBPO00560 SNORA70.4-201ENST00000365509 134 ntBASIC2.21□□□□□ -2.06
SDCBPO00560 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.21□□□□□ -2.06
SDCBPO00560 MIR128-1-201ENST00000384921 82 ntBASIC2.21□□□□□ -2.06
SDCBPO00560 RNA5SP21-201ENST00000410917 96 ntBASIC2.21□□□□□ -2.06
SDCBPO00560 RNA5SP492-201ENST00000411330 114 ntBASIC2.21□□□□□ -2.06
SDCBPO00560 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC2.21□□□□□ -2.06
SDCBPO00560 MTCYBP24-201ENST00000420387 1106 ntBASIC2.21□□□□□ -2.06
SDCBPO00560 AC073310.1-201ENST00000423226 1033 ntBASIC2.21□□□□□ -2.06
SDCBPO00560 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.21□□□□□ -2.06
SDCBPO00560 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.21□□□□□ -2.06
SDCBPO00560 AC006946.1-201ENST00000429106 328 ntBASIC2.21□□□□□ -2.06
SDCBPO00560 RPS7P2-201ENST00000435134 607 ntBASIC2.21□□□□□ -2.06
SDCBPO00560 RPL7P29-201ENST00000437151 728 ntBASIC2.21□□□□□ -2.06
SDCBPO00560 ELOCP13-201ENST00000443934 329 ntBASIC2.21□□□□□ -2.06
SDCBPO00560 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC2.21□□□□□ -2.06
SDCBPO00560 HMGB1P15-201ENST00000453854 435 ntBASIC2.21□□□□□ -2.06
SDCBPO00560 RPL23AP31-201ENST00000456160 467 ntBASIC2.21□□□□□ -2.06
SDCBPO00560 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.21□□□□□ -2.06
SDCBPO00560 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC2.21□□□□□ -2.06
SDCBPO00560 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.21□□□□□ -2.06
SDCBPO00560 SYPL1P1-201ENST00000473622 768 ntBASIC2.21□□□□□ -2.06
SDCBPO00560 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
SDCBPO00560 AC011825.1-201ENST00000484967 388 ntBASIC2.21□□□□□ -2.06
SDCBPO00560 AC080014.1-201ENST00000496877 1201 ntBASIC2.21□□□□□ -2.06
SDCBPO00560 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.21□□□□□ -2.06
SDCBPO00560 RNU1-61P-201ENST00000516107 151 ntBASIC2.21□□□□□ -2.06
SDCBPO00560 RNA5SP367-201ENST00000516557 118 ntBASIC2.21□□□□□ -2.06
SDCBPO00560 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC2.21□□□□□ -2.06
SDCBPO00560 COX6B1P6-201ENST00000522347 255 ntBASIC2.21□□□□□ -2.06
SDCBPO00560 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC2.21□□□□□ -2.06
SDCBPO00560 AC113192.3-201ENST00000529152 742 ntBASIC2.21□□□□□ -2.06
SDCBPO00560 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC2.21□□□□□ -2.06
SDCBPO00560 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC2.21□□□□□ -2.06
SDCBPO00560 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC2.21□□□□□ -2.06
SDCBPO00560 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.21□□□□□ -2.06
SDCBPO00560 AC007954.1-201ENST00000554198 494 ntBASIC2.21□□□□□ -2.06
SDCBPO00560 EIF1AXP2-201ENST00000555940 413 ntBASIC2.21□□□□□ -2.06
SDCBPO00560 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.21□□□□□ -2.06
SDCBPO00560 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC2.21□□□□□ -2.06
SDCBPO00560 AC110792.4-201ENST00000609843 298 ntBASIC2.21□□□□□ -2.06
SDCBPO00560 AC004696.1-201ENST00000614345 607 ntBASIC2.21□□□□□ -2.06
SDCBPO00560 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC2.21□□□□□ -2.06
SDCBPO00560 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.21□□□□□ -2.06
SDCBPO00560 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.21□□□□□ -2.06
SDCBPO00560 ZNF33BP1-201ENST00000452497 1834 ntBASIC2.21□□□□□ -2.06
SDCBPO00560 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.21□□□□□ -2.06
SDCBPO00560 MAPK10-322ENST00000641485 4530 ntBASIC2.21□□□□□ -2.06
SDCBPO00560 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
SDCBPO00560 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
SDCBPO00560 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
SDCBPO00560 RNU6-819P-201ENST00000364116 107 ntBASIC2.2□□□□□ -2.06
SDCBPO00560 RNU1-112P-201ENST00000364401 164 ntBASIC2.2□□□□□ -2.06
SDCBPO00560 AL591034.1-201ENST00000407447 340 ntBASIC2.2□□□□□ -2.06
SDCBPO00560 RNA5SP181-201ENST00000410246 98 ntBASIC2.2□□□□□ -2.06
SDCBPO00560 RPL19P1-201ENST00000411635 428 ntBASIC2.2□□□□□ -2.06
SDCBPO00560 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
SDCBPO00560 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.2□□□□□ -2.06
SDCBPO00560 LINC01347-201ENST00000417964 355 ntBASIC2.2□□□□□ -2.06
SDCBPO00560 AC008280.1-201ENST00000418851 412 ntBASIC2.2□□□□□ -2.06
SDCBPO00560 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.2□□□□□ -2.06
SDCBPO00560 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.2□□□□□ -2.06
SDCBPO00560 RFESDP1-201ENST00000422350 461 ntBASIC2.2□□□□□ -2.06
SDCBPO00560 YWHAZP8-201ENST00000436935 731 ntBASIC2.2□□□□□ -2.06
SDCBPO00560 RABEPKP1-201ENST00000440529 1026 ntBASIC2.2□□□□□ -2.06
SDCBPO00560 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC2.2□□□□□ -2.06
SDCBPO00560 RAD1P2-201ENST00000446414 663 ntBASIC2.2□□□□□ -2.06
SDCBPO00560 NPM1P13-201ENST00000452663 865 ntBASIC2.2□□□□□ -2.06
SDCBPO00560 RPS24P6-201ENST00000452670 400 ntBASIC2.2□□□□□ -2.06
SDCBPO00560 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC2.2□□□□□ -2.06
SDCBPO00560 AC104687.1-201ENST00000485829 412 ntBASIC2.2□□□□□ -2.06
SDCBPO00560 RPS27P27-201ENST00000498779 255 ntBASIC2.2□□□□□ -2.06
SDCBPO00560 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
SDCBPO00560 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.2□□□□□ -2.06
SDCBPO00560 RNU6-711P-201ENST00000517255 106 ntBASIC2.2□□□□□ -2.06
SDCBPO00560 HMGB1P41-201ENST00000520234 440 ntBASIC2.2□□□□□ -2.06
SDCBPO00560 CKS1BP7-201ENST00000522230 235 ntBASIC2.2□□□□□ -2.06
SDCBPO00560 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC2.2□□□□□ -2.06
SDCBPO00560 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.2□□□□□ -2.06
SDCBPO00560 NTAN1P1-201ENST00000603150 646 ntBASIC2.2□□□□□ -2.06
SDCBPO00560 AC096947.1-201ENST00000603233 470 ntBASIC2.2□□□□□ -2.06
SDCBPO00560 U73479.1-201ENST00000618062 168 ntBASIC2.2□□□□□ -2.06
SDCBPO00560 AC020923.1-201ENST00000624021 917 ntBASIC2.2□□□□□ -2.06
SDCBPO00560 NSRP1P1-201ENST00000444067 1693 ntBASIC2.2□□□□□ -2.06
SDCBPO00560 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.2□□□□□ -2.06
SDCBPO00560 MTND4P8-201ENST00000514997 1362 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 134.4 ms