Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.4□□□□□ -2.19
CHKB-CPT1BH3BT56 MIR4635-201ENST00000583759 79 ntBASIC1.4□□□□□ -2.19
CHKB-CPT1BH3BT56 AC005242.1-201ENST00000585658 438 ntBASIC1.4□□□□□ -2.19
CHKB-CPT1BH3BT56 OR4G1P-201ENST00000588632 938 ntBASIC1.4□□□□□ -2.19
CHKB-CPT1BH3BT56 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.4□□□□□ -2.19
CHKB-CPT1BH3BT56 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC1.4□□□□□ -2.19
CHKB-CPT1BH3BT56 AC138932.5-201ENST00000617759 563 ntBASIC1.4□□□□□ -2.19
CHKB-CPT1BH3BT56 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC1.4□□□□□ -2.19
CHKB-CPT1BH3BT56 MIR492-201ENST00000638676 116 ntBASIC1.4□□□□□ -2.19
CHKB-CPT1BH3BT56 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC1.4□□□□□ -2.19
CHKB-CPT1BH3BT56 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.4□□□□□ -2.19
CHKB-CPT1BH3BT56 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
CHKB-CPT1BH3BT56 MTND4P31-201ENST00000425607 1343 ntBASIC1.4□□□□□ -2.19
CHKB-CPT1BH3BT56 SDAD1P2-201ENST00000441308 2028 ntBASIC1.39□□□□□ -2.19
CHKB-CPT1BH3BT56 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
CHKB-CPT1BH3BT56 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
CHKB-CPT1BH3BT56 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
CHKB-CPT1BH3BT56 AC073325.2-201ENST00000339545 159 ntBASIC1.39□□□□□ -2.19
CHKB-CPT1BH3BT56 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
CHKB-CPT1BH3BT56 RNA5SP124-201ENST00000362739 110 ntBASIC1.39□□□□□ -2.19
CHKB-CPT1BH3BT56 RNA5SP435-201ENST00000364044 108 ntBASIC1.39□□□□□ -2.19
CHKB-CPT1BH3BT56 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
CHKB-CPT1BH3BT56 MIR218-2-201ENST00000385006 110 ntBASIC1.39□□□□□ -2.19
CHKB-CPT1BH3BT56 MIR17-201ENST00000385012 84 ntBASIC1.39□□□□□ -2.19
CHKB-CPT1BH3BT56 RNA5SP56-201ENST00000410277 118 ntBASIC1.39□□□□□ -2.19
CHKB-CPT1BH3BT56 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC1.39□□□□□ -2.19
CHKB-CPT1BH3BT56 AL139128.1-201ENST00000413921 941 ntBASIC1.39□□□□□ -2.19
CHKB-CPT1BH3BT56 NPM1P11-201ENST00000417106 855 ntBASIC1.39□□□□□ -2.19
CHKB-CPT1BH3BT56 RPL24P2-201ENST00000421023 475 ntBASIC1.39□□□□□ -2.19
CHKB-CPT1BH3BT56 AC079355.1-201ENST00000421770 223 ntBASIC1.39□□□□□ -2.19
CHKB-CPT1BH3BT56 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC1.39□□□□□ -2.19
CHKB-CPT1BH3BT56 AC009414.1-201ENST00000427200 443 ntBASIC1.39□□□□□ -2.19
CHKB-CPT1BH3BT56 ATP5JP1-201ENST00000431631 322 ntBASIC1.39□□□□□ -2.19
CHKB-CPT1BH3BT56 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC1.39□□□□□ -2.19
CHKB-CPT1BH3BT56 AC122718.1-201ENST00000439448 744 ntBASIC1.39□□□□□ -2.19
CHKB-CPT1BH3BT56 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.39□□□□□ -2.19
CHKB-CPT1BH3BT56 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC1.39□□□□□ -2.19
CHKB-CPT1BH3BT56 AL034418.1-201ENST00000448675 860 ntBASIC1.39□□□□□ -2.19
CHKB-CPT1BH3BT56 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.39□□□□□ -2.19
CHKB-CPT1BH3BT56 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.39□□□□□ -2.19
CHKB-CPT1BH3BT56 AC104689.1-201ENST00000473356 768 ntBASIC1.39□□□□□ -2.19
CHKB-CPT1BH3BT56 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC1.39□□□□□ -2.19
CHKB-CPT1BH3BT56 HPRT1P1-201ENST00000509498 657 ntBASIC1.39□□□□□ -2.19
CHKB-CPT1BH3BT56 AC008413.1-201ENST00000511864 177 ntBASIC1.39□□□□□ -2.19
CHKB-CPT1BH3BT56 SCGB1D5P-201ENST00000515134 247 ntBASIC1.39□□□□□ -2.19
CHKB-CPT1BH3BT56 SNORA31.21-201ENST00000517180 77 ntBASIC1.39□□□□□ -2.19
CHKB-CPT1BH3BT56 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC1.39□□□□□ -2.19
CHKB-CPT1BH3BT56 AC100870.1-201ENST00000522035 505 ntBASIC1.39□□□□□ -2.19
CHKB-CPT1BH3BT56 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC1.39□□□□□ -2.19
CHKB-CPT1BH3BT56 AC083923.1-201ENST00000523708 376 ntBASIC1.39□□□□□ -2.19
CHKB-CPT1BH3BT56 AC139103.1-201ENST00000534696 1030 ntBASIC1.39□□□□□ -2.19
CHKB-CPT1BH3BT56 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC1.39□□□□□ -2.19
CHKB-CPT1BH3BT56 AC123904.3-201ENST00000547218 814 ntBASIC1.39□□□□□ -2.19
CHKB-CPT1BH3BT56 AKIRIN1P1-201ENST00000547384 544 ntBASIC1.39□□□□□ -2.19
CHKB-CPT1BH3BT56 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC1.39□□□□□ -2.19
CHKB-CPT1BH3BT56 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC1.39□□□□□ -2.19
CHKB-CPT1BH3BT56 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
CHKB-CPT1BH3BT56 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC1.39□□□□□ -2.19
CHKB-CPT1BH3BT56 MIR4448-201ENST00000584360 86 ntBASIC1.39□□□□□ -2.19
CHKB-CPT1BH3BT56 CCDC58P3-201ENST00000590792 430 ntBASIC1.39□□□□□ -2.19
CHKB-CPT1BH3BT56 XIAPP1-201ENST00000603162 600 ntBASIC1.39□□□□□ -2.19
CHKB-CPT1BH3BT56 AL009028.1-201ENST00000604895 802 ntBASIC1.39□□□□□ -2.19
CHKB-CPT1BH3BT56 AC005972.3-201ENST00000606304 481 ntBASIC1.39□□□□□ -2.19
CHKB-CPT1BH3BT56 SNORA35B-201ENST00000607417 129 ntBASIC1.39□□□□□ -2.19
CHKB-CPT1BH3BT56 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.39□□□□□ -2.19
CHKB-CPT1BH3BT56 MIR6875-201ENST00000617506 72 ntBASIC1.39□□□□□ -2.19
CHKB-CPT1BH3BT56 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC1.39□□□□□ -2.19
CHKB-CPT1BH3BT56 uc_338.20-201ENST00000621563 178 ntBASIC1.39□□□□□ -2.19
CHKB-CPT1BH3BT56 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
CHKB-CPT1BH3BT56 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC1.39□□□□□ -2.19
CHKB-CPT1BH3BT56 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
CHKB-CPT1BH3BT56 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
CHKB-CPT1BH3BT56 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
CHKB-CPT1BH3BT56 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
CHKB-CPT1BH3BT56 RNU6-263P-201ENST00000363811 107 ntBASIC1.38□□□□□ -2.19
CHKB-CPT1BH3BT56 SNORA68.1-201ENST00000364537 132 ntBASIC1.38□□□□□ -2.19
CHKB-CPT1BH3BT56 MDM4-202ENST00000367180 547 ntTSL 3 BASIC1.38□□□□□ -2.19
CHKB-CPT1BH3BT56 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
CHKB-CPT1BH3BT56 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC1.38□□□□□ -2.19
CHKB-CPT1BH3BT56 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC1.38□□□□□ -2.19
CHKB-CPT1BH3BT56 OR52E6-202ENST00000379946 954 ntBASIC1.38□□□□□ -2.19
CHKB-CPT1BH3BT56 U3.22-201ENST00000391120 215 ntBASIC1.38□□□□□ -2.19
CHKB-CPT1BH3BT56 SPTLC1P2-201ENST00000407089 121 ntBASIC1.38□□□□□ -2.19
CHKB-CPT1BH3BT56 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.38□□□□□ -2.19
CHKB-CPT1BH3BT56 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC1.38□□□□□ -2.19
CHKB-CPT1BH3BT56 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC1.38□□□□□ -2.19
CHKB-CPT1BH3BT56 RPF2P1-201ENST00000424137 906 ntBASIC1.38□□□□□ -2.19
CHKB-CPT1BH3BT56 MYL8P-204ENST00000431574 518 ntBASIC1.38□□□□□ -2.19
CHKB-CPT1BH3BT56 ATP5F1P1-201ENST00000433775 569 ntBASIC1.38□□□□□ -2.19
CHKB-CPT1BH3BT56 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC1.38□□□□□ -2.19
CHKB-CPT1BH3BT56 RPL21P89-201ENST00000444021 467 ntBASIC1.38□□□□□ -2.19
CHKB-CPT1BH3BT56 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
CHKB-CPT1BH3BT56 AL157827.1-201ENST00000447622 132 ntBASIC1.38□□□□□ -2.19
CHKB-CPT1BH3BT56 AL359073.1-201ENST00000448036 403 ntBASIC1.38□□□□□ -2.19
CHKB-CPT1BH3BT56 NIPA2P5-201ENST00000452282 464 ntBASIC1.38□□□□□ -2.19
CHKB-CPT1BH3BT56 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC1.38□□□□□ -2.19
CHKB-CPT1BH3BT56 NAP1L1P3-201ENST00000462291 880 ntBASIC1.38□□□□□ -2.19
CHKB-CPT1BH3BT56 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC1.38□□□□□ -2.19
CHKB-CPT1BH3BT56 RPL7P19-201ENST00000469948 618 ntBASIC1.38□□□□□ -2.19
CHKB-CPT1BH3BT56 RN7SL293P-201ENST00000481765 281 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms