Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.02□□□□□ -1.93
TMX2-CTNND1H3BSU7 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC3.02□□□□□ -1.93
TMX2-CTNND1H3BSU7 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.02□□□□□ -1.93
TMX2-CTNND1H3BSU7 OR4T1P-201ENST00000554933 911 ntBASIC3.02□□□□□ -1.93
TMX2-CTNND1H3BSU7 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC3.02□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.02□□□□□ -1.93
TMX2-CTNND1H3BSU7 UBL5P2-201ENST00000583788 219 ntBASIC3.02□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC3.02□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC099785.1-201ENST00000605697 437 ntBASIC3.02□□□□□ -1.93
TMX2-CTNND1H3BSU7 AP002802.2-201ENST00000605877 235 ntBASIC3.02□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC105429.2-201ENST00000610567 517 ntBASIC3.02□□□□□ -1.93
TMX2-CTNND1H3BSU7 U6.48-201ENST00000618523 106 ntBASIC3.02□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC116563.2-201ENST00000624751 535 ntBASIC3.02□□□□□ -1.93
TMX2-CTNND1H3BSU7 AL121594.5-201ENST00000631724 573 ntBASIC3.02□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.02□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC099654.8-201ENST00000637757 681 ntBASIC3.02□□□□□ -1.93
TMX2-CTNND1H3BSU7 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
TMX2-CTNND1H3BSU7 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.02□□□□□ -1.93
TMX2-CTNND1H3BSU7 AL136164.4-201ENST00000625013 2135 ntBASIC3.02□□□□□ -1.93
TMX2-CTNND1H3BSU7 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
TMX2-CTNND1H3BSU7 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.01□□□□□ -1.93
TMX2-CTNND1H3BSU7 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
TMX2-CTNND1H3BSU7 MTND4P31-201ENST00000425607 1343 ntBASIC3.01□□□□□ -1.93
TMX2-CTNND1H3BSU7 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
TMX2-CTNND1H3BSU7 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
TMX2-CTNND1H3BSU7 RNU6-353P-201ENST00000364266 108 ntBASIC3.01□□□□□ -1.93
TMX2-CTNND1H3BSU7 MIR620-201ENST00000385232 95 ntBASIC3.01□□□□□ -1.93
TMX2-CTNND1H3BSU7 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC3.01□□□□□ -1.93
TMX2-CTNND1H3BSU7 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.01□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC027644.1-201ENST00000419595 298 ntBASIC3.01□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC241520.1-201ENST00000422654 1099 ntBASIC3.01□□□□□ -1.93
TMX2-CTNND1H3BSU7 AL031663.1-201ENST00000437445 219 ntBASIC3.01□□□□□ -1.93
TMX2-CTNND1H3BSU7 TPTE2P6-202ENST00000445572 1007 ntBASIC3.01□□□□□ -1.93
TMX2-CTNND1H3BSU7 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.01□□□□□ -1.93
TMX2-CTNND1H3BSU7 CCNB1IP1P3-201ENST00000454702 829 ntBASIC3.01□□□□□ -1.93
TMX2-CTNND1H3BSU7 CDC42P1-201ENST00000456658 548 ntBASIC3.01□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.01□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC006483.1-201ENST00000487308 313 ntBASIC3.01□□□□□ -1.93
TMX2-CTNND1H3BSU7 OR2A20P-203ENST00000498397 1268 ntBASIC3.01□□□□□ -1.93
TMX2-CTNND1H3BSU7 RNA5SP76-201ENST00000516277 87 ntBASIC3.01□□□□□ -1.93
TMX2-CTNND1H3BSU7 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.01□□□□□ -1.93
TMX2-CTNND1H3BSU7 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC3.01□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.01□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC107016.2-201ENST00000547968 190 ntBASIC3.01□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC095057.3-201ENST00000567102 1157 ntBASIC3.01□□□□□ -1.93
TMX2-CTNND1H3BSU7 ATP5F1P7-201ENST00000567330 760 ntBASIC3.01□□□□□ -1.93
TMX2-CTNND1H3BSU7 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.01□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.01□□□□□ -1.93
TMX2-CTNND1H3BSU7 AL606834.3-201ENST00000602615 496 ntBASIC3.01□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC091057.3-201ENST00000602684 733 ntBASIC3.01□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC013468.1-201ENST00000608680 598 ntBASIC3.01□□□□□ -1.93
TMX2-CTNND1H3BSU7 uc_338.25-201ENST00000613756 156 ntBASIC3.01□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC3.01□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC3.01□□□□□ -1.93
TMX2-CTNND1H3BSU7 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
TMX2-CTNND1H3BSU7 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
TMX2-CTNND1H3BSU7 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
TMX2-CTNND1H3BSU7 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3□□□□□ -1.93
TMX2-CTNND1H3BSU7 HSP90AA4P-202ENST00000506915 2228 ntBASIC3□□□□□ -1.93
TMX2-CTNND1H3BSU7 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
TMX2-CTNND1H3BSU7 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
TMX2-CTNND1H3BSU7 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
TMX2-CTNND1H3BSU7 U6.112-201ENST00000384129 70 ntBASIC3□□□□□ -1.93
TMX2-CTNND1H3BSU7 RNU6-851P-201ENST00000384565 107 ntBASIC3□□□□□ -1.93
TMX2-CTNND1H3BSU7 MCTS2P-201ENST00000394552 546 ntBASIC3□□□□□ -1.93
TMX2-CTNND1H3BSU7 AL590290.1-201ENST00000405336 380 ntBASIC3□□□□□ -1.93
TMX2-CTNND1H3BSU7 RNA5SP229-201ENST00000410809 99 ntBASIC3□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC096533.1-201ENST00000411645 353 ntBASIC3□□□□□ -1.93
TMX2-CTNND1H3BSU7 TRIM60P5Y-201ENST00000413946 574 ntBASIC3□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC245054.2-201ENST00000415639 319 ntBASIC3□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC093151.1-201ENST00000427711 313 ntBASIC3□□□□□ -1.93
TMX2-CTNND1H3BSU7 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3□□□□□ -1.93
TMX2-CTNND1H3BSU7 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC3□□□□□ -1.93
TMX2-CTNND1H3BSU7 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC005002.1-201ENST00000447458 540 ntBASIC3□□□□□ -1.93
TMX2-CTNND1H3BSU7 TPMTP4-201ENST00000450749 678 ntBASIC3□□□□□ -1.93
TMX2-CTNND1H3BSU7 MRPL35P4-201ENST00000453682 566 ntBASIC3□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC008280.2-201ENST00000455473 307 ntBASIC3□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC004924.1-201ENST00000480160 781 ntBASIC3□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC104687.1-201ENST00000485829 412 ntBASIC3□□□□□ -1.93
TMX2-CTNND1H3BSU7 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC026414.1-201ENST00000504046 698 ntBASIC3□□□□□ -1.93
TMX2-CTNND1H3BSU7 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
TMX2-CTNND1H3BSU7 RPL23AP94-201ENST00000512518 302 ntBASIC3□□□□□ -1.93
TMX2-CTNND1H3BSU7 PRELID3BP4-201ENST00000515476 571 ntBASIC3□□□□□ -1.93
TMX2-CTNND1H3BSU7 RNU6-416P-201ENST00000516265 103 ntBASIC3□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC009812.2-201ENST00000517657 457 ntBASIC3□□□□□ -1.93
TMX2-CTNND1H3BSU7 LY96-202ENST00000518893 430 ntTSL 3 BASIC3□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC027309.2-201ENST00000520566 192 ntBASIC3□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC3□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3□□□□□ -1.93
TMX2-CTNND1H3BSU7 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3□□□□□ -1.93
TMX2-CTNND1H3BSU7 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC139103.1-201ENST00000534696 1030 ntBASIC3□□□□□ -1.93
TMX2-CTNND1H3BSU7 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3□□□□□ -1.93
TMX2-CTNND1H3BSU7 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC3□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms