Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 CYCSP32-201ENST00000440548 321 ntBASIC4.06□□□□□ -1.76
RAI2Q9Y5P3 TRIM60P18-201ENST00000441518 828 ntBASIC4.06□□□□□ -1.76
RAI2Q9Y5P3 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC4.06□□□□□ -1.76
RAI2Q9Y5P3 RPL39P6-201ENST00000448289 150 ntBASIC4.06□□□□□ -1.76
RAI2Q9Y5P3 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.06□□□□□ -1.76
RAI2Q9Y5P3 RPS11P1-201ENST00000451072 473 ntBASIC4.06□□□□□ -1.76
RAI2Q9Y5P3 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.06□□□□□ -1.76
RAI2Q9Y5P3 RPL30P9-201ENST00000465586 330 ntBASIC4.06□□□□□ -1.76
RAI2Q9Y5P3 PLGLA-201ENST00000465668 449 ntBASIC4.06□□□□□ -1.76
RAI2Q9Y5P3 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.06□□□□□ -1.76
RAI2Q9Y5P3 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.06□□□□□ -1.76
RAI2Q9Y5P3 RN7SL271P-201ENST00000487601 295 ntBASIC4.06□□□□□ -1.76
RAI2Q9Y5P3 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.06□□□□□ -1.76
RAI2Q9Y5P3 AC004069.2-201ENST00000505438 1114 ntBASIC4.06□□□□□ -1.76
RAI2Q9Y5P3 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.06□□□□□ -1.76
RAI2Q9Y5P3 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
RAI2Q9Y5P3 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.06□□□□□ -1.76
RAI2Q9Y5P3 RNU6-150P-201ENST00000516237 95 ntBASIC4.06□□□□□ -1.76
RAI2Q9Y5P3 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
RAI2Q9Y5P3 AC087276.1-201ENST00000529659 480 ntBASIC4.06□□□□□ -1.76
RAI2Q9Y5P3 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC4.06□□□□□ -1.76
RAI2Q9Y5P3 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.06□□□□□ -1.76
RAI2Q9Y5P3 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC4.06□□□□□ -1.76
RAI2Q9Y5P3 AC022968.1-201ENST00000567372 442 ntBASIC4.06□□□□□ -1.76
RAI2Q9Y5P3 AC087752.4-201ENST00000605911 462 ntBASIC4.06□□□□□ -1.76
RAI2Q9Y5P3 AC012603.1-201ENST00000606424 528 ntBASIC4.06□□□□□ -1.76
RAI2Q9Y5P3 AC107214.2-201ENST00000608204 634 ntBASIC4.06□□□□□ -1.76
RAI2Q9Y5P3 AC010678.1-201ENST00000614118 713 ntBASIC4.06□□□□□ -1.76
RAI2Q9Y5P3 LINC00901.1-201ENST00000617252 152 ntBASIC4.06□□□□□ -1.76
RAI2Q9Y5P3 AL773545.4-201ENST00000637262 310 ntBASIC4.06□□□□□ -1.76
RAI2Q9Y5P3 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.06□□□□□ -1.76
RAI2Q9Y5P3 AL513478.4-201ENST00000641636 310 ntBASIC4.06□□□□□ -1.76
RAI2Q9Y5P3 AC009093.8-201ENST00000641769 292 ntBASIC4.06□□□□□ -1.76
RAI2Q9Y5P3 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.06□□□□□ -1.76
RAI2Q9Y5P3 AC068254.2-201ENST00000623938 3577 ntBASIC4.06□□□□□ -1.76
RAI2Q9Y5P3 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
RAI2Q9Y5P3 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.06□□□□□ -1.76
RAI2Q9Y5P3 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
RAI2Q9Y5P3 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.05□□□□□ -1.76
RAI2Q9Y5P3 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.05□□□□□ -1.76
RAI2Q9Y5P3 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
RAI2Q9Y5P3 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
RAI2Q9Y5P3 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
RAI2Q9Y5P3 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.05□□□□□ -1.76
RAI2Q9Y5P3 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.05□□□□□ -1.76
RAI2Q9Y5P3 RNA5SP391-201ENST00000363456 119 ntBASIC4.05□□□□□ -1.76
RAI2Q9Y5P3 RNA5SP72-201ENST00000364442 117 ntBASIC4.05□□□□□ -1.76
RAI2Q9Y5P3 RNU4-91P-201ENST00000364778 135 ntBASIC4.05□□□□□ -1.76
RAI2Q9Y5P3 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
RAI2Q9Y5P3 Y_RNA.500-201ENST00000384466 111 ntBASIC4.05□□□□□ -1.76
RAI2Q9Y5P3 RNU6-441P-201ENST00000384545 106 ntBASIC4.05□□□□□ -1.76
RAI2Q9Y5P3 MIR649-201ENST00000384843 97 ntBASIC4.05□□□□□ -1.76
RAI2Q9Y5P3 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.05□□□□□ -1.76
RAI2Q9Y5P3 AL023807.1-201ENST00000407932 359 ntBASIC4.05□□□□□ -1.76
RAI2Q9Y5P3 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.05□□□□□ -1.76
RAI2Q9Y5P3 AL133384.1-201ENST00000412744 351 ntBASIC4.05□□□□□ -1.76
RAI2Q9Y5P3 AC004022.2-201ENST00000413824 193 ntBASIC4.05□□□□□ -1.76
RAI2Q9Y5P3 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.05□□□□□ -1.76
RAI2Q9Y5P3 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.05□□□□□ -1.76
RAI2Q9Y5P3 AL691449.1-201ENST00000426570 421 ntBASIC4.05□□□□□ -1.76
RAI2Q9Y5P3 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.05□□□□□ -1.76
RAI2Q9Y5P3 RPL36P19-201ENST00000430744 301 ntBASIC4.05□□□□□ -1.76
RAI2Q9Y5P3 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.05□□□□□ -1.76
RAI2Q9Y5P3 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC4.05□□□□□ -1.76
RAI2Q9Y5P3 AC023347.2-201ENST00000433994 462 ntBASIC4.05□□□□□ -1.76
RAI2Q9Y5P3 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC4.05□□□□□ -1.76
RAI2Q9Y5P3 RPL23AP16-201ENST00000441715 421 ntBASIC4.05□□□□□ -1.76
RAI2Q9Y5P3 COX6CP12-201ENST00000446748 202 ntBASIC4.05□□□□□ -1.76
RAI2Q9Y5P3 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.05□□□□□ -1.76
RAI2Q9Y5P3 FABP3P2-201ENST00000453169 399 ntBASIC4.05□□□□□ -1.76
RAI2Q9Y5P3 AC007967.1-201ENST00000455422 1159 ntBASIC4.05□□□□□ -1.76
RAI2Q9Y5P3 MEMO1P3-201ENST00000459811 302 ntBASIC4.05□□□□□ -1.76
RAI2Q9Y5P3 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC4.05□□□□□ -1.76
RAI2Q9Y5P3 RPS27AP1-201ENST00000475545 471 ntBASIC4.05□□□□□ -1.76
RAI2Q9Y5P3 ACTR3P3-201ENST00000480448 893 ntBASIC4.05□□□□□ -1.76
RAI2Q9Y5P3 RPL30P11-201ENST00000495304 339 ntBASIC4.05□□□□□ -1.76
RAI2Q9Y5P3 AC114981.1-201ENST00000503897 678 ntBASIC4.05□□□□□ -1.76
RAI2Q9Y5P3 CBX3P3-201ENST00000508108 532 ntBASIC4.05□□□□□ -1.76
RAI2Q9Y5P3 ZNF705CP-201ENST00000530515 889 ntBASIC4.05□□□□□ -1.76
RAI2Q9Y5P3 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC4.05□□□□□ -1.76
RAI2Q9Y5P3 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.05□□□□□ -1.76
RAI2Q9Y5P3 GTF2IP22-201ENST00000554443 182 ntBASIC4.05□□□□□ -1.76
RAI2Q9Y5P3 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.05□□□□□ -1.76
RAI2Q9Y5P3 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.05□□□□□ -1.76
RAI2Q9Y5P3 MIR4504-201ENST00000577413 92 ntBASIC4.05□□□□□ -1.76
RAI2Q9Y5P3 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.05□□□□□ -1.76
RAI2Q9Y5P3 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.05□□□□□ -1.76
RAI2Q9Y5P3 AC078795.2-201ENST00000602835 1252 ntBASIC4.05□□□□□ -1.76
RAI2Q9Y5P3 AC079089.3-201ENST00000603094 673 ntBASIC4.05□□□□□ -1.76
RAI2Q9Y5P3 AC080078.2-201ENST00000603766 501 ntBASIC4.05□□□□□ -1.76
RAI2Q9Y5P3 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.05□□□□□ -1.76
RAI2Q9Y5P3 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.05□□□□□ -1.76
RAI2Q9Y5P3 AC025594.3-201ENST00000613068 790 ntBASIC4.05□□□□□ -1.76
RAI2Q9Y5P3 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC4.05□□□□□ -1.76
RAI2Q9Y5P3 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
RAI2Q9Y5P3 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
RAI2Q9Y5P3 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
RAI2Q9Y5P3 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RAI2Q9Y5P3 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.05□□□□□ -1.76
RAI2Q9Y5P3 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms