Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 MFSD8-245ENST00000641743 948 ntBASIC2.88□□□□□ -1.95
RHBDD3Q9Y3P4 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.88□□□□□ -1.95
RHBDD3Q9Y3P4 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
RHBDD3Q9Y3P4 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
RHBDD3Q9Y3P4 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC2.87□□□□□ -1.95
RHBDD3Q9Y3P4 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC2.87□□□□□ -1.95
RHBDD3Q9Y3P4 MIR148B-201ENST00000362252 99 ntBASIC2.87□□□□□ -1.95
RHBDD3Q9Y3P4 RNA5SP139-201ENST00000364340 117 ntBASIC2.87□□□□□ -1.95
RHBDD3Q9Y3P4 SNORA62.3-201ENST00000365110 153 ntBASIC2.87□□□□□ -1.95
RHBDD3Q9Y3P4 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
RHBDD3Q9Y3P4 AL136372.1-201ENST00000403060 228 ntBASIC2.87□□□□□ -1.95
RHBDD3Q9Y3P4 AL139098.1-201ENST00000407291 389 ntBASIC2.87□□□□□ -1.95
RHBDD3Q9Y3P4 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC2.87□□□□□ -1.95
RHBDD3Q9Y3P4 AC006960.1-201ENST00000419980 153 ntBASIC2.87□□□□□ -1.95
RHBDD3Q9Y3P4 AC012498.1-201ENST00000424037 437 ntBASIC2.87□□□□□ -1.95
RHBDD3Q9Y3P4 RPL27AP8-201ENST00000424277 446 ntBASIC2.87□□□□□ -1.95
RHBDD3Q9Y3P4 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.87□□□□□ -1.95
RHBDD3Q9Y3P4 HMGN2P31-201ENST00000432430 273 ntBASIC2.87□□□□□ -1.95
RHBDD3Q9Y3P4 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
RHBDD3Q9Y3P4 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC2.87□□□□□ -1.95
RHBDD3Q9Y3P4 ATP5C1P1-201ENST00000441945 895 ntBASIC2.87□□□□□ -1.95
RHBDD3Q9Y3P4 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC2.87□□□□□ -1.95
RHBDD3Q9Y3P4 OR6K5P-201ENST00000447050 945 ntBASIC2.87□□□□□ -1.95
RHBDD3Q9Y3P4 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC2.87□□□□□ -1.95
RHBDD3Q9Y3P4 RPL32P14-201ENST00000463196 378 ntBASIC2.87□□□□□ -1.95
RHBDD3Q9Y3P4 AC114967.1-201ENST00000504890 259 ntBASIC2.87□□□□□ -1.95
RHBDD3Q9Y3P4 AC118282.2-201ENST00000508739 374 ntBASIC2.87□□□□□ -1.95
RHBDD3Q9Y3P4 RNA5SP135-201ENST00000517019 125 ntBASIC2.87□□□□□ -1.95
RHBDD3Q9Y3P4 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.87□□□□□ -1.95
RHBDD3Q9Y3P4 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.87□□□□□ -1.95
RHBDD3Q9Y3P4 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
RHBDD3Q9Y3P4 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
RHBDD3Q9Y3P4 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.87□□□□□ -1.95
RHBDD3Q9Y3P4 MED28P6-201ENST00000558776 231 ntBASIC2.87□□□□□ -1.95
RHBDD3Q9Y3P4 NIFKP8-201ENST00000560500 874 ntBASIC2.87□□□□□ -1.95
RHBDD3Q9Y3P4 AL731537.2-201ENST00000561565 951 ntBASIC2.87□□□□□ -1.95
RHBDD3Q9Y3P4 SULT1C2P1-202ENST00000562418 459 ntBASIC2.87□□□□□ -1.95
RHBDD3Q9Y3P4 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC2.87□□□□□ -1.95
RHBDD3Q9Y3P4 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC2.87□□□□□ -1.95
RHBDD3Q9Y3P4 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC2.87□□□□□ -1.95
RHBDD3Q9Y3P4 AC015917.1-201ENST00000579654 510 ntBASIC2.87□□□□□ -1.95
RHBDD3Q9Y3P4 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC2.87□□□□□ -1.95
RHBDD3Q9Y3P4 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2.87□□□□□ -1.95
RHBDD3Q9Y3P4 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC2.87□□□□□ -1.95
RHBDD3Q9Y3P4 AL356321.1-201ENST00000621360 228 ntBASIC2.87□□□□□ -1.95
RHBDD3Q9Y3P4 AL353748.2-201ENST00000622148 471 ntBASIC2.87□□□□□ -1.95
RHBDD3Q9Y3P4 AC090617.7-201ENST00000623952 126 ntBASIC2.87□□□□□ -1.95
RHBDD3Q9Y3P4 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
RHBDD3Q9Y3P4 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
RHBDD3Q9Y3P4 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC2.87□□□□□ -1.95
RHBDD3Q9Y3P4 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.87□□□□□ -1.95
RHBDD3Q9Y3P4 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.87□□□□□ -1.95
RHBDD3Q9Y3P4 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
RHBDD3Q9Y3P4 AC011460.1-201ENST00000636268 1834 ntBASIC2.86□□□□□ -1.95
RHBDD3Q9Y3P4 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.86□□□□□ -1.95
RHBDD3Q9Y3P4 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
RHBDD3Q9Y3P4 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.86□□□□□ -1.95
RHBDD3Q9Y3P4 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
RHBDD3Q9Y3P4 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
RHBDD3Q9Y3P4 RNU6-251P-201ENST00000363235 104 ntBASIC2.86□□□□□ -1.95
RHBDD3Q9Y3P4 RNU6-792P-201ENST00000363490 107 ntBASIC2.86□□□□□ -1.95
RHBDD3Q9Y3P4 U3.11-201ENST00000364476 212 ntBASIC2.86□□□□□ -1.95
RHBDD3Q9Y3P4 MIR200C-201ENST00000384980 68 ntBASIC2.86□□□□□ -1.95
RHBDD3Q9Y3P4 AP002784.2-201ENST00000397300 549 ntBASIC2.86□□□□□ -1.95
RHBDD3Q9Y3P4 RNA5SP44-201ENST00000410446 133 ntBASIC2.86□□□□□ -1.95
RHBDD3Q9Y3P4 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC2.86□□□□□ -1.95
RHBDD3Q9Y3P4 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC2.86□□□□□ -1.95
RHBDD3Q9Y3P4 AC079780.1-201ENST00000428259 207 ntBASIC2.86□□□□□ -1.95
RHBDD3Q9Y3P4 FTH1P1-201ENST00000437933 532 ntBASIC2.86□□□□□ -1.95
RHBDD3Q9Y3P4 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC2.86□□□□□ -1.95
RHBDD3Q9Y3P4 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC2.86□□□□□ -1.95
RHBDD3Q9Y3P4 SETP11-201ENST00000473027 690 ntBASIC2.86□□□□□ -1.95
RHBDD3Q9Y3P4 SETP6-201ENST00000479329 568 ntBASIC2.86□□□□□ -1.95
RHBDD3Q9Y3P4 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC2.86□□□□□ -1.95
RHBDD3Q9Y3P4 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.86□□□□□ -1.95
RHBDD3Q9Y3P4 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC2.86□□□□□ -1.95
RHBDD3Q9Y3P4 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.86□□□□□ -1.95
RHBDD3Q9Y3P4 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC2.86□□□□□ -1.95
RHBDD3Q9Y3P4 AC048346.1-201ENST00000510247 144 ntBASIC2.86□□□□□ -1.95
RHBDD3Q9Y3P4 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC2.86□□□□□ -1.95
RHBDD3Q9Y3P4 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
RHBDD3Q9Y3P4 AP001207.2-201ENST00000519490 539 ntBASIC2.86□□□□□ -1.95
RHBDD3Q9Y3P4 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC2.86□□□□□ -1.95
RHBDD3Q9Y3P4 OR4P1P-201ENST00000530808 1136 ntBASIC2.86□□□□□ -1.95
RHBDD3Q9Y3P4 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC2.86□□□□□ -1.95
RHBDD3Q9Y3P4 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC2.86□□□□□ -1.95
RHBDD3Q9Y3P4 CFL2-206ENST00000556161 546 ntTSL 4 BASIC2.86□□□□□ -1.95
RHBDD3Q9Y3P4 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC2.86□□□□□ -1.95
RHBDD3Q9Y3P4 AC034268.2-201ENST00000571784 482 ntBASIC2.86□□□□□ -1.95
RHBDD3Q9Y3P4 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC2.86□□□□□ -1.95
RHBDD3Q9Y3P4 MIR5186-201ENST00000577504 120 ntBASIC2.86□□□□□ -1.95
RHBDD3Q9Y3P4 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC2.86□□□□□ -1.95
RHBDD3Q9Y3P4 AC012669.1-201ENST00000603209 283 ntBASIC2.86□□□□□ -1.95
RHBDD3Q9Y3P4 AP002906.1-201ENST00000603405 233 ntBASIC2.86□□□□□ -1.95
RHBDD3Q9Y3P4 AC106900.2-201ENST00000604994 317 ntBASIC2.86□□□□□ -1.95
RHBDD3Q9Y3P4 AC079791.1-201ENST00000605356 973 ntBASIC2.86□□□□□ -1.95
RHBDD3Q9Y3P4 AC092354.2-201ENST00000607786 514 ntBASIC2.86□□□□□ -1.95
RHBDD3Q9Y3P4 uc_338.1-201ENST00000612113 180 ntBASIC2.86□□□□□ -1.95
RHBDD3Q9Y3P4 AC008083.4-201ENST00000615076 444 ntBASIC2.86□□□□□ -1.95
RHBDD3Q9Y3P4 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms