Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC6.97□□□□□ -1.29
PDZRN3Q9UPQ7 AL118558.2-201ENST00000556294 238 ntBASIC6.97□□□□□ -1.29
PDZRN3Q9UPQ7 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC6.97□□□□□ -1.29
PDZRN3Q9UPQ7 AP001485.1-201ENST00000604799 199 ntBASIC6.97□□□□□ -1.29
PDZRN3Q9UPQ7 AL139124.1-201ENST00000609123 421 ntBASIC6.97□□□□□ -1.29
PDZRN3Q9UPQ7 TEX41-254ENST00000626394 423 ntTSL 5 BASIC6.97□□□□□ -1.29
PDZRN3Q9UPQ7 AC021753.1-201ENST00000635724 168 ntBASIC6.97□□□□□ -1.29
PDZRN3Q9UPQ7 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
PDZRN3Q9UPQ7 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.97□□□□□ -1.29
PDZRN3Q9UPQ7 AL137141.1-201ENST00000624622 4836 ntBASIC6.97□□□□□ -1.29
PDZRN3Q9UPQ7 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
PDZRN3Q9UPQ7 XPOTP1-201ENST00000443317 2398 ntBASIC6.97□□□□□ -1.29
PDZRN3Q9UPQ7 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
PDZRN3Q9UPQ7 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC6.97□□□□□ -1.29
PDZRN3Q9UPQ7 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC6.97□□□□□ -1.29
PDZRN3Q9UPQ7 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC6.97□□□□□ -1.29
PDZRN3Q9UPQ7 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
PDZRN3Q9UPQ7 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.29
PDZRN3Q9UPQ7 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
PDZRN3Q9UPQ7 AP001029.2-203ENST00000589795 4910 ntBASIC6.96□□□□□ -1.29
PDZRN3Q9UPQ7 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.29
PDZRN3Q9UPQ7 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.96□□□□□ -1.29
PDZRN3Q9UPQ7 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.29
PDZRN3Q9UPQ7 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.29
PDZRN3Q9UPQ7 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.29
PDZRN3Q9UPQ7 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
PDZRN3Q9UPQ7 AC004656.1-201ENST00000568479 4951 ntBASIC6.96□□□□□ -1.3
PDZRN3Q9UPQ7 U3.2-201ENST00000362981 210 ntBASIC6.96□□□□□ -1.3
PDZRN3Q9UPQ7 RN7SKP103-201ENST00000363848 320 ntBASIC6.96□□□□□ -1.3
PDZRN3Q9UPQ7 CDC123-202ENST00000378900 933 ntTSL 5 BASIC6.96□□□□□ -1.3
PDZRN3Q9UPQ7 U3.36-201ENST00000408418 213 ntBASIC6.96□□□□□ -1.3
PDZRN3Q9UPQ7 RNA5SP345-201ENST00000410646 108 ntBASIC6.96□□□□□ -1.3
PDZRN3Q9UPQ7 BOLA3P4-201ENST00000418151 400 ntBASIC6.96□□□□□ -1.3
PDZRN3Q9UPQ7 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC6.96□□□□□ -1.3
PDZRN3Q9UPQ7 AL034379.1-201ENST00000423216 253 ntBASIC6.96□□□□□ -1.3
PDZRN3Q9UPQ7 AC007283.2-201ENST00000424739 197 ntBASIC6.96□□□□□ -1.3
PDZRN3Q9UPQ7 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC6.96□□□□□ -1.3
PDZRN3Q9UPQ7 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC6.96□□□□□ -1.3
PDZRN3Q9UPQ7 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC6.96□□□□□ -1.3
PDZRN3Q9UPQ7 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC6.96□□□□□ -1.3
PDZRN3Q9UPQ7 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC6.96□□□□□ -1.3
PDZRN3Q9UPQ7 PRPF38AP1-201ENST00000451976 933 ntBASIC6.96□□□□□ -1.3
PDZRN3Q9UPQ7 TRGVB-201ENST00000453257 471 ntBASIC6.96□□□□□ -1.3
PDZRN3Q9UPQ7 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC6.96□□□□□ -1.3
PDZRN3Q9UPQ7 RPS18P6-201ENST00000476880 458 ntBASIC6.96□□□□□ -1.3
PDZRN3Q9UPQ7 ATP5LP5-201ENST00000483050 299 ntBASIC6.96□□□□□ -1.3
PDZRN3Q9UPQ7 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC6.96□□□□□ -1.3
PDZRN3Q9UPQ7 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC6.96□□□□□ -1.3
PDZRN3Q9UPQ7 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC6.96□□□□□ -1.3
PDZRN3Q9UPQ7 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC6.96□□□□□ -1.3
PDZRN3Q9UPQ7 OR1F2P-201ENST00000570470 933 ntBASIC6.96□□□□□ -1.3
PDZRN3Q9UPQ7 AC022884.2-201ENST00000578535 580 ntBASIC6.96□□□□□ -1.3
PDZRN3Q9UPQ7 AC025574.2-201ENST00000615621 514 ntBASIC6.96□□□□□ -1.3
PDZRN3Q9UPQ7 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC6.96□□□□□ -1.3
PDZRN3Q9UPQ7 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC6.96□□□□□ -1.3
PDZRN3Q9UPQ7 AL606534.2-204ENST00000635008 178 ntBASIC6.96□□□□□ -1.3
PDZRN3Q9UPQ7 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC6.96□□□□□ -1.3
PDZRN3Q9UPQ7 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
PDZRN3Q9UPQ7 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC6.96□□□□□ -1.3
PDZRN3Q9UPQ7 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
PDZRN3Q9UPQ7 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
PDZRN3Q9UPQ7 ERVFRD-3-201ENST00000578561 1617 ntBASIC6.95□□□□□ -1.3
PDZRN3Q9UPQ7 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
PDZRN3Q9UPQ7 AC004972.1-201ENST00000623934 2209 ntBASIC6.95□□□□□ -1.3
PDZRN3Q9UPQ7 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
PDZRN3Q9UPQ7 Y_RNA.64-201ENST00000362845 102 ntBASIC6.95□□□□□ -1.3
PDZRN3Q9UPQ7 RNU6-806P-201ENST00000365147 105 ntBASIC6.95□□□□□ -1.3
PDZRN3Q9UPQ7 RNU1-106P-201ENST00000384382 164 ntBASIC6.95□□□□□ -1.3
PDZRN3Q9UPQ7 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC6.95□□□□□ -1.3
PDZRN3Q9UPQ7 GPS2P1-201ENST00000411761 986 ntBASIC6.95□□□□□ -1.3
PDZRN3Q9UPQ7 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC6.95□□□□□ -1.3
PDZRN3Q9UPQ7 RBMY1KP-201ENST00000423480 476 ntBASIC6.95□□□□□ -1.3
PDZRN3Q9UPQ7 AL353777.1-201ENST00000425552 326 ntBASIC6.95□□□□□ -1.3
PDZRN3Q9UPQ7 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
PDZRN3Q9UPQ7 AC073465.2-201ENST00000440938 498 ntBASIC6.95□□□□□ -1.3
PDZRN3Q9UPQ7 RPS11P7-201ENST00000442125 465 ntBASIC6.95□□□□□ -1.3
PDZRN3Q9UPQ7 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC6.95□□□□□ -1.3
PDZRN3Q9UPQ7 CYCSP24-201ENST00000445119 316 ntBASIC6.95□□□□□ -1.3
PDZRN3Q9UPQ7 AC079781.2-201ENST00000446424 169 ntBASIC6.95□□□□□ -1.3
PDZRN3Q9UPQ7 AL353752.1-201ENST00000454946 260 ntBASIC6.95□□□□□ -1.3
PDZRN3Q9UPQ7 AC006499.2-201ENST00000513470 337 ntBASIC6.95□□□□□ -1.3
PDZRN3Q9UPQ7 RN7SKP82-201ENST00000516786 223 ntBASIC6.95□□□□□ -1.3
PDZRN3Q9UPQ7 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC6.95□□□□□ -1.3
PDZRN3Q9UPQ7 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC6.95□□□□□ -1.3
PDZRN3Q9UPQ7 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC6.95□□□□□ -1.3
PDZRN3Q9UPQ7 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC6.95□□□□□ -1.3
PDZRN3Q9UPQ7 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC6.95□□□□□ -1.3
PDZRN3Q9UPQ7 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC6.95□□□□□ -1.3
PDZRN3Q9UPQ7 AC138761.3-201ENST00000579993 334 ntBASIC6.95□□□□□ -1.3
PDZRN3Q9UPQ7 MIR4436B2-201ENST00000581415 91 ntBASIC6.95□□□□□ -1.3
PDZRN3Q9UPQ7 MIR3118-1-201ENST00000581787 76 ntBASIC6.95□□□□□ -1.3
PDZRN3Q9UPQ7 MIR4436B1-201ENST00000583272 91 ntBASIC6.95□□□□□ -1.3
PDZRN3Q9UPQ7 MIR4424-201ENST00000585257 86 ntBASIC6.95□□□□□ -1.3
PDZRN3Q9UPQ7 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC6.95□□□□□ -1.3
PDZRN3Q9UPQ7 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC6.95□□□□□ -1.3
PDZRN3Q9UPQ7 AC010900.2-201ENST00000604508 210 ntBASIC6.95□□□□□ -1.3
PDZRN3Q9UPQ7 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC6.95□□□□□ -1.3
PDZRN3Q9UPQ7 DPY19L2P2-203ENST00000435536 1858 ntBASIC6.95□□□□□ -1.3
PDZRN3Q9UPQ7 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
PDZRN3Q9UPQ7 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC6.95□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms